RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 TUBA4AP68366 448 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 ROR2Q01974 943 aaKnown RBP7.41□□□□□ -1.22
PRKCB-208ENST00000487674 IQCCQ4KMZ1 466 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 CEP85LQ5SZL2 805 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 HHATQ5VTY9 493 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 VHLLQ6RSH7 139 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 C5orf46Q6UWT4 87 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 C6orf89Q6UWU4 347 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 IL17RELQ6ZVW7 336 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 TUBA1AQ71U36 451 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 CROCCP2Q86T23 111 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 SERPINA11Q86U17 422 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 CLIP4Q8N3C7 705 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 ITCHQ96J02 903 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 FOXN4Q96NZ1 517 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 PAIP2Q9BPZ3 127 aaKnown RBP7.41□□□□□ -1.22
PRKCB-208ENST00000487674 PTDSS2Q9BVG9 487 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 C19orf24Q9BVV8 132 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 BPESC1Q9GZL8 116 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 RAB1BQ9H0U4 201 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 RMND5AQ9H871 391 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 TPT1P8Q9HAU6 139 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 KCNK9Q9NPC2 374 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 SDR39U1Q9NRG7 319 aaPredicted RBP7.41□□□□□ -1.22
PRKCB-208ENST00000487674 THAP1Q9NVV9 213 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 ZIM2Q9NZV7 527 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 ZNF232Q9UNY5 417 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 IFT52Q9Y366 437 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 CHST2Q9Y4C5 530 aa7.41□□□□□ -1.22
PRKCB-208ENST00000487674 hCG_2039718K7EN88 272 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 NR5A2O00482 541 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 AKAP8O43823 692 aaKnown RBP7.4□□□□□ -1.22
PRKCB-208ENST00000487674 SLC43A1O75387 559 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 ZNF432O94892 652 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 CBR1P16152 277 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 ZNF43P17038 809 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 GIFP27352 417 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 ARR3P36575 388 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 RPS5P46782 204 aaKnown RBP7.4□□□□□ -1.22
PRKCB-208ENST00000487674 CLDN17P56750 224 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 HGFACQ04756 655 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 EGR4Q05215 589 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 FADDQ13158 208 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 SQLEQ14534 574 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 GTDC1Q4AE62 458 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 ZNF311Q5JNZ3 666 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 C6orf10Q5SRN2 563 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 ATG16L1Q676U5 607 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 NXNQ6DKJ4 435 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 GPR137CQ8N3F9 429 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 ANKRD42Q8N9B4 389 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 BBS10Q8TAM1 723 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 NEU4Q8WWR8 484 aaPredicted RBP7.4□□□□□ -1.22
PRKCB-208ENST00000487674 VPS33AQ96AX1 596 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 SLC25A36Q96CQ1 311 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 MAELQ96JY0 434 aaKnown RBP7.4□□□□□ -1.22
PRKCB-208ENST00000487674 ANKRD27Q96NW4 1050 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 RAD21L1Q9H4I0 556 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 SEC61A2Q9H9S3 476 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 C12orf10Q9HB07 376 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 BCL2L10Q9HD36 194 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 A4GALTQ9NPC4 353 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 B3GAT1Q9P2W7 334 aa7.4□□□□□ -1.22
PRKCB-208ENST00000487674 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.4□□□□□ -1.22
PRKCB-208ENST00000487674 V9GYY5 206 aaPredicted RBP7.4□□□□□ -1.22
PRKCB-208ENST00000487674 NBEAL1Q6ZS30 2694 aa7.4□□□□□ -1.23
PRKCB-208ENST00000487674 IGHV2OR16-5A0A0B4J2B6 119 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 TMEM120BA0PK00 339 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 VSTM5A8MXK1 200 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 M0R082 166 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 AIM2O14862 343 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 OR2T1O43869 369 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 STAMBPO95630 424 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 TGFAP01135 160 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 CELA3BP08861 270 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 TACSTD2P09758 323 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 KITP10721 976 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 DAOP14920 347 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 NPR2P20594 1047 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 PRKAR1BP31321 381 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 THBS4P35443 961 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 POLR2JP52435 117 aaKnown RBP7.39□□□□□ -1.23
PRKCB-208ENST00000487674 CHN2P52757 468 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 ARF1P84077 181 aaKnown RBP7.39□□□□□ -1.23
PRKCB-208ENST00000487674 HOXC5Q00444 222 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 POU3F1Q03052 451 aaPredicted RBP7.39□□□□□ -1.23
PRKCB-208ENST00000487674 C1DQ13901 141 aaKnown RBP7.39□□□□□ -1.23
PRKCB-208ENST00000487674 RGNQ15493 299 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 CR1LQ2VPA4 569 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 CEACAM16Q2WEN9 425 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 FAM69AQ5T7M9 428 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 MDP1Q86V88 176 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 MYPOPQ86VE0 399 aaPredicted RBP7.39□□□□□ -1.23
PRKCB-208ENST00000487674 CCDC36Q8IYA8 594 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 TMEM123Q8N131 208 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 MIER2Q8N344 545 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 KDM8Q8N371 416 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 SVOPLQ8N434 492 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 GOLGA6L1Q8N7Z2 621 aa7.39□□□□□ -1.23
PRKCB-208ENST00000487674 ADPRHL1Q8NDY3 354 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms