RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 ZP3P21754 424 aa3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 NMT1P30419 496 aaKnown RBP3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 TAGLN2P37802 199 aaKnown RBP3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 OR3A4PP47883 348 aa3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 FGL1Q08830 312 aa3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 ELAVL3Q14576 367 aaKnown RBP3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 KIAA0040Q15053 153 aa3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 RABL6Q3YEC7 729 aaPredicted RBP3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 CCDC137Q6PK04 289 aaKnown RBP3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 MOB1BQ7L9L4 216 aa3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 C17orf82Q86X59 251 aaPredicted RBP3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 ZBED8Q8IZ13 594 aa3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 CATSPER1Q8NEC5 780 aa3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 SLC41A3Q96GZ6 507 aa3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 COQ2Q96H96 371 aa3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 IL4I1Q96RQ9 567 aa3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 SECISBP2Q96T21 854 aaKnown RBP3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 SLC35A5Q9BS91 424 aa3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 RNF126Q9BV68 326 aa3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 SMYD3Q9H7B4 428 aa3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 ZNF702PQ9H963 129 aa3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 VNN3Q9NY84 501 aa3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 CA5BQ9Y2D0 317 aa3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 PLLPQ9Y342 182 aa3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 TIMM10BQ9Y5J6 103 aa3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 MROH7Q68CQ1 1323 aa3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 LCTP09848 1927 aa3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 TET1Q8NFU7 2136 aa3.64□□□□□ -1.83
PRPF38A-203ENST00000487160 DMDP11532 3685 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 VPS13AQ96RL7 3174 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 ERI2A8K979 691 aaKnown RBP3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 E7ESA3 106 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 HCN1O60741 890 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 SERF1AO75920 110 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 CAPN1P07384 714 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 NCK1P16333 377 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 ADORA1P30542 326 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 FGF9P31371 208 aaPredicted RBP3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 GRIA1P42261 906 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 TDO2P48775 406 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 P2RY4P51582 365 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 ACLYP53396 1101 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 KRTAP10-12P60413 245 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 MECOMQ03112 1051 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 SLC10A7Q0GE19 358 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 AANATQ16613 207 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 Q6ZPB1 254 aaPredicted RBP3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 DNM1P46Q6ZS02 220 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 SVOPLQ8N434 492 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 OR5D13Q8NGL4 314 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 TCTEX1D2Q8WW35 142 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 C12orf42Q96LP6 360 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 ZNF670Q9BS34 389 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 CAPS2Q9BXY5 557 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 SRXN1Q9BYN0 137 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 POPDC2Q9HBU9 364 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 TNFRSF19Q9NS68 423 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 CDH9Q9ULB4 789 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 UBQLN1Q9UMX0 589 aaKnown RBP3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 POLDIP2Q9Y2S7 368 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 FANCIQ9NVI1 1328 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 SYNRGQ9UMZ2 1314 aa3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 KMT2BQ9UMN6 2715 aaPredicted RBP3.63□□□□□ -1.83
PRPF38A-203ENST00000487160 DMXL1Q9Y485 3027 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 ZDBF2Q9HCK1 2354 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 COL4A6Q14031 1691 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 MICAL3Q7RTP6 2002 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 TUBAL3A6NHL2 446 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 CXCL13O43927 109 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 OR10H3O60404 316 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 SCGNO76038 276 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 IGHV3-23P01764 117 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 RNH1P13489 461 aaKnown RBP3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 IL9P15248 144 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 GCAP28676 217 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 YWHABP31946 246 aaKnown RBP3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 LEPP41159 167 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 DAP3P51398 398 aaKnown RBP3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 IGLV3-21P80748 117 aaPredicted RBP3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 LRRC36Q1X8D7 754 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 OR4F3Q6IEY1 312 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 NLRP9Q7RTR0 991 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 CCDC50Q8IVM0 306 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 SKA3Q8IX90 412 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 NRMQ8IXM6 262 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 BHLHE23Q8NDY6 225 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 OR56B4Q8NH76 319 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 MAIP1Q8WWC4 291 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 MRPS31Q92665 395 aaKnown RBP3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 FGGYQ96C11 551 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 GLT1D1Q96MS3 346 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 NUDT15Q9NV35 164 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 COX16Q9P0S2 106 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 ONECUT1Q9UBC0 465 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 PHF11Q9UIL8 331 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 SMAD5-AS1Q9Y6J3 95 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 KIAA1671Q9BY89 1806 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 TECTAO75443 2155 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 MYH7P12883 1935 aa3.62□□□□□ -1.83
PRPF38A-203ENST00000487160 LRRK1Q38SD2 2015 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms