RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 SUMF2Q8NBJ7 301 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 MNS1Q8NEH6 495 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 OR1L6Q8NGR2 347 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 ACOT11Q8WXI4 607 aaPredicted RBP2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 ARPC1AQ92747 370 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 ELSPBP1Q96BH3 223 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 TPD52L3Q96J77 140 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 PLEKHA8Q96JA3 519 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 C12orf42Q96LP6 360 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 MBOAT4Q96T53 435 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 TCHPQ9BT92 498 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 CHRDL1Q9BU40 450 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 PKIBQ9C010 78 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 ROGDIQ9GZN7 287 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 RANBP3Q9H6Z4 567 aaPredicted RBP2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 METTL7AQ9H8H3 244 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 LY9Q9HBG7 655 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 NT5MQ9NPB1 228 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 DAZ3Q9NR90 486 aaKnown RBP2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 MMP26Q9NRE1 261 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 QPCTLQ9NXS2 382 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 IKZF2Q9UKS7 526 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 RRP15Q9Y3B9 282 aaKnown RBP2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 CHD4Q14839 1912 aa2.4□□□□□ -2.03
SNRNP27-204ENST00000487029 A0A1W2PPV9 198 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 XKRY2A2RUG3 117 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 GJE1A6NN92 205 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 TRIM49D1C9J1S8 452 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 KRTAP4-16G5E9R7 235 aaPredicted RBP2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 H0Y9J4 135 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 DYNC1I1O14576 645 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 ZNF861PO60384 105 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 KLF8O95600 359 aaPredicted RBP2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 GAPDHP04406 335 aaKnown RBP2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 FGF1P05230 155 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 CHTF8P0CG12 524 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 HSD17B2P37059 387 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 FDFT1P37268 417 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 CTRLP40313 264 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 CRYBB2P43320 205 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 YAP1P46937 504 aaKnown RBP2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 GPNMBQ14956 572 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 CYTH1Q15438 398 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 KCTD21Q4G0X4 260 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 C2orf83Q53S99 150 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 C1orf94Q6P1W5 598 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 ZNF620Q6ZNG0 422 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 PAQR7Q86WK9 346 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 RALGPS2Q86X27 583 aaPredicted RBP2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 PSTKQ8IV42 348 aaKnown RBP2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 PIANPQ8IYJ0 282 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 SLC34A3Q8N130 599 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 OR9K2Q8NGE7 335 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 FANK1Q8TC84 345 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 FGF14Q92915 247 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 MYDGFQ969H8 173 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 TUBGCP3Q96CW5 907 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 FCRL1Q96LA6 429 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 RASL11BQ9BPW5 248 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 PAIP2Q9BPZ3 127 aaKnown RBP2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 TMEM246Q9BRR3 403 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 PELOQ9BRX2 385 aaKnown RBP2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 RIOK2Q9BVS4 552 aaKnown RBP2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 FAIM2Q9BWQ8 316 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 OR11A1Q9GZK7 315 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 MFFQ9GZY8 342 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 SIAEQ9HAT2 523 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 ABCB10Q9NRK6 738 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 GLRX2Q9NS18 164 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 NYAP2Q9P242 653 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 RPS6KB2Q9UBS0 482 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 SLC7A8Q9UHI5 535 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 MMP17Q9ULZ9 603 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 RABL2BQ9UNT1 228 aa2.39□□□□□ -2.03
SNRNP27-204ENST00000487029 NINLQ9Y2I6 1382 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 A0A0G2JLM5 398 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 TRIM64CA6NLI5 447 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 C12orf71A8MTZ7 269 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 C12orf77C9JDV5 145 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 TRAF3IP2O43734 574 aaPredicted RBP2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 FAM189A1O60320 539 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 TMEM50AO95807 157 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 MCF2P10911 925 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 CCNE1P24864 410 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 DRD3P35462 400 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 VHLP40337 213 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 SH3BGRP55822 239 aaPredicted RBP2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 BST2Q10589 180 aaKnown RBP2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 CTRB2Q6GPI1 263 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 C6orf89Q6UWU4 347 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 CDR2LQ86X02 465 aaPredicted RBP2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 SLC22A9Q8IVM8 553 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 MFSD6LQ8IWD5 586 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 CDH26Q8IXH8 852 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 RNF175Q8N4F7 328 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 Q8N7P7 452 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 SDR9C7Q8NEX9 313 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 OR4F6Q8NGB9 312 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 AKR7LQ8NHP1 331 aa2.38□□□□□ -2.03
SNRNP27-204ENST00000487029 SLC2A14Q8TDB8 520 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms