RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 CLEC2DQ9UHP7 191 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 MMACHCQ9Y4U1 282 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 SLC22A7Q9Y694 548 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 SPTY2D1-AS1A0A0U1RR47 76 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 TRDV1A0A1B0GX56 115 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 SOCS6O14544 535 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 PRH1P02810 166 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 COL9A1P20849 921 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 TRIM23P36406 574 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 SSR4P51571 173 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 ART1P52961 327 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 GFERP55789 205 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 EIF2B1Q14232 305 aaKnown RBP10.16□□□□□ -0.78
HDAC6-228ENST00000486227 LRRC37A5PQ49AS3 106 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 GXYLT1Q4G148 440 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 TOR2AQ5JU69 321 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 LINC00696Q6ZRV3 163 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 ARPC5LQ9BPX5 153 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 BIN3Q9NQY0 253 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 SCN10AQ9Y5Y9 1956 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 RGPD4Q7Z3J3 1758 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 IGHV3-20A0A0C4DH32 117 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 A0A1B0GVC2 190 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 A6NIN4 97 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 M0R036 132 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 RAF1P04049 648 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 TCRBP04435 133 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 CSF3P09919 207 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 NID1P14543 1247 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 TEAD1P28347 426 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 SLC1A3P43003 542 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 SQSTM1Q13501 440 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 ZMYND11Q15326 602 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 NKAIN1Q4KMZ8 207 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 NANOGP1Q8N7R0 232 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 RCBTB1Q8NDN9 531 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 SLC25A18Q9H1K4 315 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 UBQLN3Q9H347 655 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 ABRACLQ9P1F3 81 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 TET1Q8NFU7 2136 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 H7C1C5 153 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 UPK1AO00322 258 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 HSPA12AO43301 675 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 PAPLNO95428 1278 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 FPR3P25089 353 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 S100A2P29034 98 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 LCN6P62502 163 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 BTG2P78543 158 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 GPR50Q13585 617 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 BAK1Q16611 211 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 C6orf15Q6UXA7 325 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-228ENST00000486227 LINC01555Q8NAE3 123 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 TMEM178AQ8NBL3 297 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 LMF1Q96S06 567 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 IER2Q9BTL4 223 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 NDUFB11Q9NX14 153 aa10.16□□□□□ -0.78
HDAC6-228ENST00000486227 WSB2Q9NYS7 404 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-228ENST00000486227 AGAP14A8MT82 685 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 C5orf67F2Z3F1 127 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 GMDSO60547 372 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 MT-ND4P03905 459 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 ZNF14P17017 642 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-228ENST00000486227 EPHA2P29317 976 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 CCL11P51671 97 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 ARHGDIBP52566 201 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 RAE1P78406 368 aaKnown RBP10.15□□□□□ -0.78
HDAC6-228ENST00000486227 MC2RQ01718 297 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 POU3F1Q03052 451 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-228ENST00000486227 MESP2Q0VG99 397 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 ARSJQ5FYB0 599 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-228ENST00000486227 PRAMEF20Q5VT98 475 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 TMEM92Q6UXU6 159 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 OR5T2Q8NGG2 359 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 NRTNQ99748 197 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 hCG_1807616A0A1W2PRN6 198 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 PRKNO60260 465 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-228ENST00000486227 NCR1O76036 304 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 ECH1Q13011 328 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 NXNL2Q5VZ03 156 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 GPR139Q6DWJ6 353 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 LYPD4Q6UWN0 246 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 CNEP1R1Q8N9A8 125 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 ZNF680Q8NEM1 530 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 GPR148Q8TDV2 347 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 ZNF578Q96N58 590 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-228ENST00000486227 STACQ99469 402 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 MED17Q9NVC6 651 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 C13orf42A0A1B0GVH6 325 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 A6NIZ1 184 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 M0R082 166 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 AKR7A2O43488 359 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 DAP3P51398 398 aaKnown RBP10.15□□□□□ -0.78
HDAC6-228ENST00000486227 WNT3P56703 355 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 RAP1BP61224 184 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 RAP1AP62834 184 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 FOXK2Q01167 660 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 ABCA11PQ4W5N1 156 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 VWA2Q5GFL6 755 aa10.15□□□□□ -0.78
HDAC6-228ENST00000486227 YOD1Q5VVQ6 348 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-228ENST00000486227 CALHM3Q86XJ0 350 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms