RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 AJUBAQ96IF1 538 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 MS4A10Q96PG2 267 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 RASL10BQ96S79 203 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 PAPOLGQ9BWT3 736 aaKnown RBP4.77□□□□□ -1.65
CCDC39-205ENST00000485055 TPK1Q9H3S4 243 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 FAM96AQ9H5X1 160 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 MRPS30Q9NP92 439 aaKnown RBP4.77□□□□□ -1.65
CCDC39-205ENST00000485055 CUTCQ9NTM9 273 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 EIF3KQ9UBQ5 218 aaKnown RBP4.77□□□□□ -1.65
CCDC39-205ENST00000485055 PSORS1C1Q9UIG5 152 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 FLVCR2Q9UPI3 526 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 LSM4Q9Y4Z0 139 aaKnown RBP4.77□□□□□ -1.65
CCDC39-205ENST00000485055 TSSC4Q9Y5U2 329 aaPredicted RBP4.77□□□□□ -1.65
CCDC39-205ENST00000485055 DMXL2Q8TDJ6 3036 aa4.77□□□□□ -1.65
CCDC39-205ENST00000485055 FRYQ5TBA9 3013 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 A8MU76 341 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 AIM2O14862 343 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 DENRO43583 198 aaKnown RBP4.76□□□□□ -1.65
CCDC39-205ENST00000485055 PRB1P04280 392 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 APRTP07741 180 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 IFI6P09912 130 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 VPREB1P12018 145 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 HSD11B1P28845 292 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 APOBEC3AP31941 199 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-205ENST00000485055 CD79BP40259 229 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 MRPL19P49406 292 aaKnown RBP4.76□□□□□ -1.65
CCDC39-205ENST00000485055 AGTR2P50052 363 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 SPCS2Q15005 226 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 CHI3L2Q15782 390 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 PPP1R3AQ16821 1122 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 DEFB109BQ30KR1 87 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 HP1BP3Q5SSJ5 553 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-205ENST00000485055 FAM45BPQ6NSW5 357 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 CHDHQ8NE62 594 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-205ENST00000485055 FBXO36Q8NEA4 188 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 OR13C3Q8NGS6 347 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 FAM110BQ8TC76 370 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 FAM45AQ8TCE6 357 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 CHPT1Q8WUD6 406 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 NUDCD2Q8WVJ2 157 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 HPS1Q92902 700 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 TMEM45BQ96B21 275 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 KCTD12Q96CX2 325 aaKnown RBP4.76□□□□□ -1.65
CCDC39-205ENST00000485055 SFXN2Q96NB2 322 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 WDR77Q9BQA1 342 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-205ENST00000485055 APOL2Q9BQE5 337 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 TRMOQ9BU70 441 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 WWTR1Q9GZV5 400 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 LHPPQ9H008 270 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 SPRTNQ9H040 489 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-205ENST00000485055 ING2Q9H160 280 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 GSX1Q9H4S2 264 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-205ENST00000485055 MTHFD2LQ9H903 347 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-205ENST00000485055 OR2S2Q9NQN1 319 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 BATF3Q9NR55 127 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 ABCD2Q9UBJ2 740 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 RALYQ9UKM9 306 aaKnown RBP4.76□□□□□ -1.65
CCDC39-205ENST00000485055 FBXL3Q9UKT7 428 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 NDRG4Q9ULP0 352 aaKnown RBP4.76□□□□□ -1.65
CCDC39-205ENST00000485055 GUCA1BQ9UMX6 200 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 ZNF835Q9Y2P0 537 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 NPTNQ9Y639 398 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 KNTC1P50748 2209 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 ZFHX4Q86UP3 3567 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 IGHV1-45A0A0A0MS14 117 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 TCRBV7S3A2A0A539 114 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 HYKKA2RU49 373 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 LRRN3E7EW58 273 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 HAX1O00165 279 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 RS1O15537 224 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 FOXS1O43638 330 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 CTSVO60911 334 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 SERPINA7P05543 415 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 PRSS56P0CW18 603 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 EEF1B2P24534 225 aaKnown RBP4.76□□□□□ -1.65
CCDC39-205ENST00000485055 UGT2B10P36537 528 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 NDUFA9Q16795 377 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 ARL13AQ5H913 290 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-205ENST00000485055 RABL3Q5HYI8 236 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 TEDDM1Q5T9Z0 273 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 CXXC5Q7LFL8 322 aaKnown RBP4.76□□□□□ -1.65
CCDC39-205ENST00000485055 PRSS45Q7RTY3 260 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 DHDDSQ86SQ9 333 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 ZFP82Q8N141 532 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 MUC20Q8N307 709 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-205ENST00000485055 GALNT16Q8N428 558 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 BHLHE22Q8NFJ8 381 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-205ENST00000485055 SPPL2AQ8TCT8 520 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 SCMH1Q96GD3 660 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 COQ2Q96H96 371 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 BCL2L14Q9BZR8 327 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 C20orf96Q9NUD7 363 aaPredicted RBP4.76□□□□□ -1.65
CCDC39-205ENST00000485055 TMCO1Q9UM00 188 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 FAM96BQ9Y3D0 163 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 MRPS18BQ9Y676 258 aaKnown RBP4.76□□□□□ -1.65
CCDC39-205ENST00000485055 ZZEF1O43149 2961 aa4.76□□□□□ -1.65
CCDC39-205ENST00000485055 IGKV3D-11A0A0A0MRZ8 115 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 ASPDHA6ND91 283 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 CBY3A6NI87 242 aa4.75□□□□□ -1.65
CCDC39-205ENST00000485055 UBCP0CG48 685 aaKnown RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms