RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 MED29Q9NX70 200 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 PSMC3IPQ9P2W1 217 aaPredicted RBP9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 DUSP13Q9UII6 198 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 RASD1Q9Y272 281 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 ZNF281Q9Y2X9 895 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 CACNG2Q9Y698 323 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 A0A1W2PPW3 197 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 AGAP5A6NIR3 686 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 FTCDNL1E5RQL4 147 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 HMGN4O00479 90 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 RIPK2O43353 540 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 SLC43A1O75387 559 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 GKN3PP0CG01 181 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 PNMTP11086 282 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 CD79AP11912 226 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 MDKP21741 143 aaPredicted RBP9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 CCL8P80075 99 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 SYPL1Q16563 259 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 GSG1Q2KHT4 349 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 C1orf140Q5VVS0 124 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 SAXO2Q658L1 398 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 RBMS3Q6XE24 437 aaKnown RBP9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 DOK3Q7L591 496 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 CMIPQ8IY22 773 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 GPR137CQ8N3F9 429 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 CADM2Q8N3J6 435 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 NOA1Q8NC60 698 aaKnown RBP9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 RAB39BQ96DA2 213 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 ZNF48Q96MX3 618 aaPredicted RBP9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 ZNF385DQ9H6B1 395 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 B3GAT1Q9P2W7 334 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 ZNF69Q9UC07 566 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 RCE1Q9Y256 329 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 NOX1Q9Y5S8 564 aa9.27□□□□□ -0.93
SMARCC1-205ENST00000483847 POM121CA8CG34 1229 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 A8MVM7 634 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 RNASET2O00584 256 aaKnown RBP9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 NPIPB7O75200 414 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 CPSF4O95639 269 aaKnown RBP9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 CLPTM1O96005 669 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 TFPTP0C1Z6 253 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 PRG2P13727 222 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 RPS4Y1P22090 263 aaKnown RBP9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 CRHR1P34998 444 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 ACAA2P42765 397 aaKnown RBP9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 AQP5P55064 265 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 CLDN8P56748 225 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 IL13RA1P78552 427 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 LCN2P80188 198 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 HPCAP84074 193 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 GSTA3Q16772 222 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 TRMT5Q32P41 509 aaKnown RBP9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 GLIPR1L2Q4G1C9 344 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 GKAP1Q5VSY0 366 aaPredicted RBP9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 LEG1Q6P5S2 330 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 TMEM123Q8N131 208 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 C17orf53Q8N3J3 647 aaPredicted RBP9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 SLC25A36Q96CQ1 311 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 TSPAN32Q96QS1 320 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 OR2M2Q96R28 347 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 PKP2Q99959 881 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 SLITRK2Q9H156 845 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 ZNF224Q9NZL3 707 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 PDP1Q9P0J1 537 aaPredicted RBP9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 WIPI2Q9Y4P8 454 aa9.26□□□□□ -0.93
SMARCC1-205ENST00000483847 C17orf100A8MU93 164 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 ZNF99A8MXY4 864 aaPredicted RBP9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 M0R3G1 203 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 TRIM13O60858 407 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 RNASE1P07998 156 aaKnown RBP9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 UQCRBP14927 111 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 IL7RP16871 459 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 ZNF43P17038 809 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 UQCRC2P22695 453 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 OMGP23515 440 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 ARRB2P32121 409 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 CRYBB2P43320 205 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 RPS5P46782 204 aaKnown RBP9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 GIPRP48546 466 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 CCT5P48643 541 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 PTDSS1P48651 473 aaKnown RBP9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 GALK2Q01415 458 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 BAMBIQ13145 260 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 CHI3L2Q15782 390 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 OCLNQ16625 522 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 NKPD1Q17RQ9 610 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 KLF17Q5JT82 389 aaPredicted RBP9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 ATG16L1Q676U5 607 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 WDFY1Q8IWB7 410 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 CCDC36Q8IYA8 594 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 GTF3AQ92664 365 aaKnown RBP9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 NEURL3Q96EH8 262 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 TRNT1Q96Q11 434 aaKnown RBP9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 PTDSS2Q9BVG9 487 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 TAAR3PQ9P1P4 343 aa9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 MARCOQ9UEW3 520 aaPredicted RBP9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 ZNF346Q9UL40 294 aaKnown RBP9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 KMT2CQ8NEZ4 4911 aaKnown RBP9.25□□□□□ -0.93
SMARCC1-205ENST00000483847 IGHV1-69-2A0A0G2JMI3 117 aa9.24□□□□□ -0.93
SMARCC1-205ENST00000483847 CDHR4A6H8M9 788 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms