RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 LRRN3E7EW58 273 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 TRAF3IP2O43734 574 aaPredicted RBP15.62■□□□□ 0.09
ATG4B-221ENST00000483778 CRYAAP02489 173 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 PRKAR1BP31321 381 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 THBS4P35443 961 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 NR4A2P43354 598 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 CDK6Q00534 326 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 SRSF2Q01130 221 aaKnown RBP15.62■□□□□ 0.09
ATG4B-221ENST00000483778 GGTLC2Q14390 218 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 CARTPTQ16568 116 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 GCNT6Q5T4J0 391 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 CARD17Q5XLA6 110 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 REEP3Q6NUK4 255 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 DHRS4L2Q6PKH6 230 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 IL17RELQ6ZVW7 336 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 H1FNTQ75WM6 255 aaPredicted RBP15.62■□□□□ 0.09
ATG4B-221ENST00000483778 SLC35B4Q969S0 331 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 SPDL1Q96EA4 605 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 C7orf26Q96N11 449 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 MOGAT1Q96PD6 335 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 SOX7Q9BT81 388 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 NOX3Q9HBY0 568 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 CRLF2Q9HC73 371 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 KLHL14Q9P2G3 628 aa15.62■□□□□ 0.09
ATG4B-221ENST00000483778 OR6C65A6NJZ3 312 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 SLC43A1O75387 559 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 IGKV3-15P01624 115 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 BGLAPP02818 100 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 FAM157CP0CG43 387 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 BMP4P12644 408 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 CBR1P16152 277 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 AQP1P29972 269 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 PDLIM4P50479 330 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 IDH3GP51553 393 aaPredicted RBP15.61■□□□□ 0.09
ATG4B-221ENST00000483778 AQP5P55064 265 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 C1DQ13901 141 aaKnown RBP15.61■□□□□ 0.09
ATG4B-221ENST00000483778 MSMPQ1L6U9 139 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 AGKQ53H12 422 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 ALG10BQ5I7T1 473 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 FAM69AQ5T7M9 428 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 DLEU7Q6UYE1 221 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 SLC46A3Q7Z3Q1 461 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 MDP1Q86V88 176 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 SLC38A4Q969I6 547 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 MSI2Q96DH6 328 aaKnown RBP15.61■□□□□ 0.09
ATG4B-221ENST00000483778 DOK1Q99704 481 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 KCNS3Q9BQ31 491 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 REPIN1Q9BWE0 567 aaKnown RBP15.61■□□□□ 0.09
ATG4B-221ENST00000483778 PLK3Q9H4B4 646 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 RAD21L1Q9H4I0 556 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 CACYBPQ9HB71 228 aaKnown RBP15.61■□□□□ 0.09
ATG4B-221ENST00000483778 RCE1Q9Y256 329 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 SVEP1Q4LDE5 3571 aa15.61■□□□□ 0.09
ATG4B-221ENST00000483778 TRAV36DV7A0A075B6V5 113 aa15.6■□□□□ 0.09
ATG4B-221ENST00000483778 IGHV2OR16-5A0A0B4J2B6 119 aa15.6■□□□□ 0.09
ATG4B-221ENST00000483778 LOC102725191A0A1B0GVB3 256 aa15.6■□□□□ 0.09
ATG4B-221ENST00000483778 M0R3G1 203 aa15.6■□□□□ 0.09
ATG4B-221ENST00000483778 AIM2O14862 343 aa15.6■□□□□ 0.09
ATG4B-221ENST00000483778 PHF1O43189 567 aaPredicted RBP15.6■□□□□ 0.09
ATG4B-221ENST00000483778 IFNA2P01563 188 aa15.6■□□□□ 0.09
ATG4B-221ENST00000483778 GPX2P18283 190 aa15.6■□□□□ 0.09
ATG4B-221ENST00000483778 IL1RL1Q01638 556 aa15.6■□□□□ 0.09
ATG4B-221ENST00000483778 OR1Q1Q15612 314 aa15.6■□□□□ 0.09
ATG4B-221ENST00000483778 C3orf36Q3SXR2 165 aa15.6■□□□□ 0.09
ATG4B-221ENST00000483778 GPR137CQ8N3F9 429 aa15.6■□□□□ 0.09
ATG4B-221ENST00000483778 FAM169BQ8N8A8 192 aa15.6■□□□□ 0.09
ATG4B-221ENST00000483778 RNF217Q8TC41 542 aa15.6■□□□□ 0.09
ATG4B-221ENST00000483778 BEX2Q9BXY8 128 aa15.6■□□□□ 0.09
ATG4B-221ENST00000483778 C12orf10Q9HB07 376 aa15.6■□□□□ 0.09
ATG4B-221ENST00000483778 B3GNT2Q9NY97 397 aa15.6■□□□□ 0.09
ATG4B-221ENST00000483778 A0A087WUJ7 227 aa15.59■□□□□ 0.09
ATG4B-221ENST00000483778 B9A039 149 aa15.59■□□□□ 0.09
ATG4B-221ENST00000483778 POLR3GO15318 223 aaPredicted RBP15.59■□□□□ 0.09
ATG4B-221ENST00000483778 OR2T1O43869 369 aa15.59■□□□□ 0.09
ATG4B-221ENST00000483778 LMX1BO60663 402 aa15.59■□□□□ 0.09
ATG4B-221ENST00000483778 TGDSO95455 350 aa15.59■□□□□ 0.09
ATG4B-221ENST00000483778 CSF3P09919 207 aa15.59■□□□□ 0.09
ATG4B-221ENST00000483778 HOXB1P14653 301 aaPredicted RBP15.59■□□□□ 0.09
ATG4B-221ENST00000483778 IGFBP5P24593 272 aa15.59■□□□□ 0.09
ATG4B-221ENST00000483778 GTF2E2P29084 291 aaKnown RBP15.59■□□□□ 0.09
ATG4B-221ENST00000483778 CDH12P55289 794 aa15.59■□□□□ 0.09
ATG4B-221ENST00000483778 SH3BGRP55822 239 aaPredicted RBP15.59■□□□□ 0.09
ATG4B-221ENST00000483778 STX1BP61266 288 aa15.59■□□□□ 0.09
ATG4B-221ENST00000483778 SNRPD2P62316 118 aaKnown RBP15.59■□□□□ 0.09
ATG4B-221ENST00000483778 NPRL3Q12980 569 aa15.59■□□□□ 0.09
ATG4B-221ENST00000483778 SCARB2Q14108 478 aa15.59■□□□□ 0.09
ATG4B-221ENST00000483778 EFNB3Q15768 340 aa15.59■□□□□ 0.09
ATG4B-221ENST00000483778 AGBL2Q5U5Z8 902 aa15.59■□□□□ 0.09
ATG4B-221ENST00000483778 ULK3Q6PHR2 472 aa15.59■□□□□ 0.09
ATG4B-221ENST00000483778 C20orf196Q8IYI0 205 aa15.59■□□□□ 0.09
ATG4B-221ENST00000483778 SVOPLQ8N434 492 aa15.59■□□□□ 0.09
ATG4B-221ENST00000483778 DNAJA4Q8WW22 397 aaPredicted RBP15.59■□□□□ 0.09
ATG4B-221ENST00000483778 THOC1Q96FV9 657 aaKnown RBP15.59■□□□□ 0.09
ATG4B-221ENST00000483778 SLC41A3Q96GZ6 507 aa15.59■□□□□ 0.09
ATG4B-221ENST00000483778 MS4A3Q96HJ5 214 aa15.59■□□□□ 0.09
ATG4B-221ENST00000483778 ZNF75AQ96N20 296 aa15.59■□□□□ 0.09
ATG4B-221ENST00000483778 CPPED1Q9BRF8 314 aaPredicted RBP15.59■□□□□ 0.09
ATG4B-221ENST00000483778 CCDC28BQ9BUN5 200 aa15.59■□□□□ 0.09
ATG4B-221ENST00000483778 MED29Q9NX70 200 aa15.59■□□□□ 0.09
ATG4B-221ENST00000483778 CDC42EP3Q9UKI2 254 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms