RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 FOXJ3Q9UPW0 622 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 MOKQ9UQ07 419 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 WDR45Q9Y484 360 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 K7EQS6 105 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 ZNF254O75437 659 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 RASGRP1O95267 797 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 CDK5R1Q15078 307 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 TMEM64Q6YI46 380 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 NUDT18Q6ZVK8 323 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 SYNPRQ8TBG9 265 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 SMIM19Q96E16 107 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 CMTM3Q96MX0 182 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 PRSS27Q9BQR3 290 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 ADAT1Q9BUB4 502 aaKnown RBP13.1□□□□□ -0.31
COL9A2-207ENST00000482722 NOX4Q9NPH5 578 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 CMC2Q9NRP2 79 aa13.1□□□□□ -0.31
COL9A2-207ENST00000482722 PHPT1Q9NRX4 125 aaPredicted RBP13.1□□□□□ -0.31
COL9A2-207ENST00000482722 TMEM272A0A1B0GTI8 110 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 A0A1B0GW55 424 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 FAM86C2PA6NEL3 165 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 ZNF860A6NHJ4 632 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 IFITM5A6NNB3 132 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 OGG1O15527 345 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 ATG12O94817 140 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 PPP1R3DO95685 299 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 DUX4L2P0CJ85 424 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 DUX4L3P0CJ86 424 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 DUX4L4P0CJ87 422 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 DUX4L5P0CJ88 424 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 DUX4L6P0CJ89 424 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 DUX4L7P0CJ90 424 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 HTR2AP28223 471 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 PPP2CBP62714 309 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 PPP2CAP67775 309 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 SGCGQ13326 291 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 HAGHLQ6PII5 290 aaPredicted RBP13.09□□□□□ -0.31
COL9A2-207ENST00000482722 RAB11FIP2Q7L804 512 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 CBLN2Q8IUK8 224 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 TMEFF1Q8IYR6 380 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 PUSL1Q8N0Z8 303 aaKnown RBP13.09□□□□□ -0.31
COL9A2-207ENST00000482722 TMEM185AQ8NFB2 350 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 OR7G2Q8NG99 324 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 DUX4Q9UBX2 424 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 CACNA1CQ13936 2221 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 TBC1D3DA0A087WVF3 549 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 TBC1D3IA0A087WXS9 549 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 TBC1D3EA0A087X179 549 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 TBC1D3KA0A087X1G2 549 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 TBC1D3FA6NER0 549 aaPredicted RBP13.09□□□□□ -0.31
COL9A2-207ENST00000482722 ANKRD61A6NGH8 418 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 TBC1D3LB9A6J9 549 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 DISC1C4P0D8 188 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 PIN1P1O15428 100 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 TBC1D3HP0C7X1 549 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 RPA2P15927 270 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 CDK2P24941 298 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 PEBP1P30086 187 aaKnown RBP13.09□□□□□ -0.31
COL9A2-207ENST00000482722 PRKAR1BP31321 381 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 ZIC1Q15915 447 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 TBC1D3GQ6DHY5 549 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 TBC1D3CQ6IPX1 549 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 TSSK4Q6SA08 328 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 LDLRAD3Q86YD5 345 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 TBC1D3Q8IZP1 549 aaPredicted RBP13.09□□□□□ -0.31
COL9A2-207ENST00000482722 EID2Q8N6I1 236 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 OR2L8Q8NGY9 312 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 SFXN5Q8TD22 340 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 GRHL3Q8TE85 626 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 RAB7BQ96AH8 199 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 ZNF764Q96H86 408 aaPredicted RBP13.09□□□□□ -0.31
COL9A2-207ENST00000482722 TSNAXQ99598 290 aaKnown RBP13.09□□□□□ -0.31
COL9A2-207ENST00000482722 TEX101Q9BY14 249 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 FKRPQ9H9S5 495 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 TMEM138Q9NPI0 162 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 FBXO34Q9NWN3 711 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 CABIN1Q9Y6J0 2220 aa13.09□□□□□ -0.31
COL9A2-207ENST00000482722 A0A087WV48 116 aa13.08□□□□□ -0.32
COL9A2-207ENST00000482722 ACOD1A6NK06 481 aa13.08□□□□□ -0.32
COL9A2-207ENST00000482722 LINC00587B1AMM8 73 aa13.08□□□□□ -0.32
COL9A2-207ENST00000482722 ZNF888P0CJ79 500 aaPredicted RBP13.08□□□□□ -0.32
COL9A2-207ENST00000482722 SRMP19623 302 aa13.08□□□□□ -0.32
COL9A2-207ENST00000482722 COL9A1P20849 921 aa13.08□□□□□ -0.32
COL9A2-207ENST00000482722 SLC2A5P22732 501 aa13.08□□□□□ -0.32
COL9A2-207ENST00000482722 ZNF136P52737 540 aa13.08□□□□□ -0.32
COL9A2-207ENST00000482722 ZNF528Q3MIS6 628 aa13.08□□□□□ -0.32
COL9A2-207ENST00000482722 DEFB134Q4QY38 66 aa13.08□□□□□ -0.32
COL9A2-207ENST00000482722 C11orf88Q6PI97 169 aa13.08□□□□□ -0.32
COL9A2-207ENST00000482722 TNFAIP8L1Q8WVP5 186 aa13.08□□□□□ -0.32
COL9A2-207ENST00000482722 TMEM239Q8WW34 195 aa13.08□□□□□ -0.32
COL9A2-207ENST00000482722 S100A16Q96FQ6 103 aaKnown RBP13.08□□□□□ -0.32
COL9A2-207ENST00000482722 MFRPQ9BY79 579 aa13.08□□□□□ -0.32
COL9A2-207ENST00000482722 ACTRT3Q9BYD9 372 aa13.08□□□□□ -0.32
COL9A2-207ENST00000482722 PITHD1Q9GZP4 211 aaPredicted RBP13.08□□□□□ -0.32
COL9A2-207ENST00000482722 WDR13Q9H1Z4 485 aa13.08□□□□□ -0.32
COL9A2-207ENST00000482722 CACYBPQ9HB71 228 aaKnown RBP13.08□□□□□ -0.32
COL9A2-207ENST00000482722 PRDM9Q9NQV7 894 aa13.08□□□□□ -0.32
COL9A2-207ENST00000482722 CES1P1Q9UKY3 287 aa13.08□□□□□ -0.32
COL9A2-207ENST00000482722 TRBV2A0A0J9YWF9 115 aa13.08□□□□□ -0.32
COL9A2-207ENST00000482722 OR2W5A6NFC9 320 aa13.08□□□□□ -0.32
COL9A2-207ENST00000482722 IDSB3KWA1 339 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms