RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 CLDN8P56748 225 aa11.44□□□□□ -0.58
NDC1-202ENST00000480952 COPZ1P61923 177 aa11.44□□□□□ -0.58
NDC1-202ENST00000480952 RPS23P62266 143 aaKnown RBP11.44□□□□□ -0.58
NDC1-202ENST00000480952 PIGFQ07326 219 aa11.44□□□□□ -0.58
NDC1-202ENST00000480952 ALKBH6Q3KRA9 238 aa11.44□□□□□ -0.58
NDC1-202ENST00000480952 XKR7Q5GH72 579 aa11.44□□□□□ -0.58
NDC1-202ENST00000480952 C1orf140Q5VVS0 124 aa11.44□□□□□ -0.58
NDC1-202ENST00000480952 KIF18AQ8NI77 898 aa11.44□□□□□ -0.58
NDC1-202ENST00000480952 MGARPQ8TDB4 240 aa11.44□□□□□ -0.58
NDC1-202ENST00000480952 SLC25A36Q96CQ1 311 aa11.44□□□□□ -0.58
NDC1-202ENST00000480952 MS4A3Q96HJ5 214 aa11.44□□□□□ -0.58
NDC1-202ENST00000480952 ZNF385DQ9H6B1 395 aa11.44□□□□□ -0.58
NDC1-202ENST00000480952 MTHFD2LQ9H903 347 aaPredicted RBP11.44□□□□□ -0.58
NDC1-202ENST00000480952 MED29Q9NX70 200 aa11.44□□□□□ -0.58
NDC1-202ENST00000480952 ZNF346Q9UL40 294 aaKnown RBP11.44□□□□□ -0.58
NDC1-202ENST00000480952 RCE1Q9Y256 329 aa11.44□□□□□ -0.58
NDC1-202ENST00000480952 VWFP04275 2813 aa11.44□□□□□ -0.58
NDC1-202ENST00000480952 PRAMEF27A3QJZ7 478 aa11.43□□□□□ -0.58
NDC1-202ENST00000480952 ZNF99A8MXY4 864 aaPredicted RBP11.43□□□□□ -0.58
NDC1-202ENST00000480952 FRS3O43559 492 aa11.43□□□□□ -0.58
NDC1-202ENST00000480952 NUDT17P0C025 328 aa11.43□□□□□ -0.58
NDC1-202ENST00000480952 MAGEB1P43366 347 aa11.43□□□□□ -0.58
NDC1-202ENST00000480952 IL13RA1P78552 427 aa11.43□□□□□ -0.58
NDC1-202ENST00000480952 C1DQ13901 141 aaKnown RBP11.43□□□□□ -0.58
NDC1-202ENST00000480952 SYPL1Q16563 259 aa11.43□□□□□ -0.58
NDC1-202ENST00000480952 NKPD1Q17RQ9 610 aa11.43□□□□□ -0.58
NDC1-202ENST00000480952 GSG1Q2KHT4 349 aa11.43□□□□□ -0.58
NDC1-202ENST00000480952 MRPL2Q5T653 305 aaKnown RBP11.43□□□□□ -0.58
NDC1-202ENST00000480952 WBP2NLQ6ICG8 309 aa11.43□□□□□ -0.58
NDC1-202ENST00000480952 ANKRD46Q86W74 232 aa11.43□□□□□ -0.58
NDC1-202ENST00000480952 ZNF440Q8IYI8 595 aa11.43□□□□□ -0.58
NDC1-202ENST00000480952 ANKFN1Q8N957 763 aa11.43□□□□□ -0.58
NDC1-202ENST00000480952 TUBGCP3Q96CW5 907 aa11.43□□□□□ -0.58
NDC1-202ENST00000480952 TRIM44Q96DX7 344 aaPredicted RBP11.43□□□□□ -0.58
NDC1-202ENST00000480952 TRNT1Q96Q11 434 aaKnown RBP11.43□□□□□ -0.58
NDC1-202ENST00000480952 B3GNT2Q9NY97 397 aa11.43□□□□□ -0.58
NDC1-202ENST00000480952 MARCOQ9UEW3 520 aaPredicted RBP11.43□□□□□ -0.58
NDC1-202ENST00000480952 OPN4Q9UHM6 478 aa11.43□□□□□ -0.58
NDC1-202ENST00000480952 MID2Q9UJV3 735 aa11.43□□□□□ -0.58
NDC1-202ENST00000480952 PRSS51A0A1B0GVH4 220 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 M0R3G1 203 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 DEAF1O75398 565 aaPredicted RBP11.42□□□□□ -0.58
NDC1-202ENST00000480952 AHSA1O95433 338 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 DBIP07108 87 aaKnown RBP11.42□□□□□ -0.58
NDC1-202ENST00000480952 GKN3PP0CG01 181 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 PNMTP11086 282 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 GTF2E2P29084 291 aaKnown RBP11.42□□□□□ -0.58
NDC1-202ENST00000480952 PTDSS1P48651 473 aaKnown RBP11.42□□□□□ -0.58
NDC1-202ENST00000480952 CCL8P80075 99 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 TEKQ02763 1124 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 PCLAFQ15004 111 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 FXNQ16595 210 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 MMEL1Q495T6 779 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 SAXO2Q658L1 398 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 TMEM154Q6P9G4 183 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 C17orf53Q8N3J3 647 aaPredicted RBP11.42□□□□□ -0.58
NDC1-202ENST00000480952 PIK3C3Q8NEB9 887 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 VPS37AQ8NEZ2 397 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 MFSD8Q8NHS3 518 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 DVL3Q92997 716 aaPredicted RBP11.42□□□□□ -0.58
NDC1-202ENST00000480952 LRRC58Q96CX6 371 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 NEURL3Q96EH8 262 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 OXGR1Q96P68 337 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 SLITRK2Q9H156 845 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 SLC38A1Q9H2H9 487 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 ZMAT3Q9HA38 289 aaKnown RBP11.42□□□□□ -0.58
NDC1-202ENST00000480952 RLIMQ9NVW2 624 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 ARMCX1Q9P291 453 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 ZDHHC2Q9UIJ5 367 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 GPR160Q9UJ42 338 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 PRDM4Q9UKN5 801 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 ZNF281Q9Y2X9 895 aa11.42□□□□□ -0.58
NDC1-202ENST00000480952 CMYA5Q8N3K9 4069 aa11.41□□□□□ -0.58
NDC1-202ENST00000480952 A0A096LPI6 279 aa11.41□□□□□ -0.58
NDC1-202ENST00000480952 DNAJC9-AS1A6NH13 148 aa11.41□□□□□ -0.58
NDC1-202ENST00000480952 HMGN4O00479 90 aa11.41□□□□□ -0.58
NDC1-202ENST00000480952 NPHS1O60500 1241 aa11.41□□□□□ -0.58
NDC1-202ENST00000480952 FSHBP01225 129 aa11.41□□□□□ -0.58
NDC1-202ENST00000480952 IGHV2-5P01817 119 aa11.41□□□□□ -0.58
NDC1-202ENST00000480952 ZNF14P17017 642 aaPredicted RBP11.41□□□□□ -0.58
NDC1-202ENST00000480952 NCF2P19878 526 aaPredicted RBP11.41□□□□□ -0.58
NDC1-202ENST00000480952 LSP1P33241 339 aa11.41□□□□□ -0.58
NDC1-202ENST00000480952 SELENOVP59797 346 aa11.41□□□□□ -0.58
NDC1-202ENST00000480952 BAMBIQ13145 260 aa11.41□□□□□ -0.58
NDC1-202ENST00000480952 MAD2L1Q13257 205 aaPredicted RBP11.41□□□□□ -0.58
NDC1-202ENST00000480952 ANXA8L1Q5VT79 327 aa11.41□□□□□ -0.58
NDC1-202ENST00000480952 ATG16L1Q676U5 607 aa11.41□□□□□ -0.58
NDC1-202ENST00000480952 LRRC74BQ6ZQY2 392 aa11.41□□□□□ -0.58
NDC1-202ENST00000480952 DOK3Q7L591 496 aa11.41□□□□□ -0.58
NDC1-202ENST00000480952 RETREG3Q86VR2 466 aa11.41□□□□□ -0.58
NDC1-202ENST00000480952 NOA1Q8NC60 698 aaKnown RBP11.41□□□□□ -0.58
NDC1-202ENST00000480952 OR8J2Q8NGG1 315 aa11.41□□□□□ -0.58
NDC1-202ENST00000480952 TIMD4Q96H15 378 aa11.41□□□□□ -0.58
NDC1-202ENST00000480952 GPA33Q99795 319 aa11.41□□□□□ -0.58
NDC1-202ENST00000480952 SLC35A5Q9BS91 424 aa11.41□□□□□ -0.58
NDC1-202ENST00000480952 HINT3Q9NQE9 182 aaKnown RBP11.41□□□□□ -0.58
NDC1-202ENST00000480952 NOP53Q9NZM5 478 aaKnown RBP11.41□□□□□ -0.58
NDC1-202ENST00000480952 TAAR3PQ9P1P4 343 aa11.41□□□□□ -0.58
NDC1-202ENST00000480952 IGHV1-69-2A0A0G2JMI3 117 aa11.4□□□□□ -0.58
NDC1-202ENST00000480952 CDHR4A6H8M9 788 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms