RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 UTP6Q9NYH9 597 aaKnown RBP-0.55□□□□□ -2.5
CALD1-218ENST00000478075 AKAP7Q9P0M2 348 aaPredicted RBP-0.55□□□□□ -2.5
CALD1-218ENST00000478075 SEPT10Q9P0V9 454 aa-0.55□□□□□ -2.5
CALD1-218ENST00000478075 NPIPA1Q9UND3 350 aa-0.55□□□□□ -2.5
CALD1-218ENST00000478075 CBY1Q9Y3M2 126 aa-0.55□□□□□ -2.5
CALD1-218ENST00000478075 CREBBPQ92793 2442 aa-0.55□□□□□ -2.5
CALD1-218ENST00000478075 SDK1Q7Z5N4 2213 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 CLSPNQ9HAW4 1339 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 BTNL10A8MVZ5 291 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 ZBTB14O43829 449 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 ZNF73O43830 326 aaPredicted RBP-0.56□□□□□ -2.5
CALD1-218ENST00000478075 PRKYO43930 277 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 S1PR2O95136 353 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 FSTL3O95633 263 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 P0DMU3 169 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 FAM231AP0DMU4 169 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 FAM231CP0DMU5 169 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 UQCRFS1P47985 274 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 CSNK1A1P48729 337 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 PRKXP51817 358 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 CDH4P55283 916 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 PPIL2Q13356 520 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 GINS1Q14691 196 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 ADPRMQ3LIE5 342 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 STUMQ69YW2 141 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 SLC30A6Q6NXT4 461 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 METTL23Q86XA0 190 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 FAM71AQ8IYT1 594 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 OR4K5Q8NGD3 323 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 C15orf40Q8WUR7 153 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 PHYHIPQ92561 330 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 TBL1YQ9BQ87 522 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 SLC30A2Q9BRI3 323 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 MRPL37Q9BZE1 423 aaKnown RBP-0.56□□□□□ -2.5
CALD1-218ENST00000478075 RANBP3Q9H6Z4 567 aaPredicted RBP-0.56□□□□□ -2.5
CALD1-218ENST00000478075 IKZF2Q9UKS7 526 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 ZNF490Q9ULM2 529 aaPredicted RBP-0.56□□□□□ -2.5
CALD1-218ENST00000478075 OARD1Q9Y530 152 aa-0.56□□□□□ -2.5
CALD1-218ENST00000478075 ZFC3H1O60293 1989 aaKnown RBP-0.56□□□□□ -2.5
CALD1-218ENST00000478075 BAZ2AQ9UIF9 1905 aaKnown RBP-0.56□□□□□ -2.5
CALD1-218ENST00000478075 RYR1P21817 5038 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 APCP25054 2843 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 TRAV6A0A075B6T7 132 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 IGKV1OR2-108A0A075B7D4 117 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 TMEM89A2RUT3 159 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 C12orf77C9JDV5 145 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 E9PMD0 336 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 CCER2I3L3R5 266 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 SGK494L7N484 410 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 ATP6V1G1O75348 118 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 GABARAPO95166 117 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 NDUFA7O95182 113 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 AIFM1O95831 613 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 CSF3P09919 207 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 GKN3PP0CG01 181 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 VCLP18206 1134 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 PAICSP22234 425 aaKnown RBP-0.57□□□□□ -2.5
CALD1-218ENST00000478075 ANXA13P27216 316 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 MARCKSP29966 332 aaPredicted RBP-0.57□□□□□ -2.5
CALD1-218ENST00000478075 MAGEA5P43359 124 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 TSPY1Q01534 308 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 RAB40BQ12829 278 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 FZD2Q14332 565 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 ZBED5Q49AG3 693 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 GPRC6AQ5T6X5 926 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 CPTPQ5TA50 214 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 PRAMEF8Q5VWM4 474 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 SPINK6Q6UWN8 80 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 NCCRP1Q6ZVX7 275 aaPredicted RBP-0.57□□□□□ -2.5
CALD1-218ENST00000478075 STRADAQ7RTN6 431 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 PRSS42Q7Z5A4 293 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 PCGF5Q86SE9 256 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 LINC01561Q8N1V8 128 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 OR8U1Q8NH10 309 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 M1APQ8TC57 530 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 C10orf105Q8TEF2 133 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 ABHD3Q8WU67 409 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP-0.57□□□□□ -2.5
CALD1-218ENST00000478075 SHC3Q92529 594 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 RAPGEF5Q92565 580 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 RPL3LQ92901 407 aaKnown RBP-0.57□□□□□ -2.5
CALD1-218ENST00000478075 MR1Q95460 341 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 UPRTQ96BW1 309 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 HPDLQ96IR7 371 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 DUSP16Q9BY84 665 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 RACGAP1Q9H0H5 632 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 TRPV5Q9NQA5 729 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 COPS7AQ9UBW8 275 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 MAD2L2Q9UI95 211 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 FOXJ3Q9UPW0 622 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 WNK2Q9Y3S1 2297 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 FAM208BQ5VWN6 2430 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 HSPG2P98160 4391 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 TENM2Q9NT68 2774 aa-0.57□□□□□ -2.5
CALD1-218ENST00000478075 PTPRZ1P23471 2315 aaPredicted RBP-0.58□□□□□ -2.5
CALD1-218ENST00000478075 ZANQ9Y493 2812 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 WASHC1A8K0Z3 465 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 G3V4G9 280 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 DCTN6O00399 190 aa-0.58□□□□□ -2.5
CALD1-218ENST00000478075 MANBAO00462 879 aa-0.58□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms