RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 MMP28Q9H239 520 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 TP63Q9H3D4 680 aaPredicted RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 MED20Q9H944 212 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 ISG20L2Q9H9L3 353 aaKnown RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 FOLH1BQ9HBA9 442 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 ADGRL4Q9HBW9 690 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 MKKSQ9NPJ1 570 aaPredicted RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 C20orf141Q9NUB4 165 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 TMEM74BQ9NUR3 256 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 FBXO34Q9NWN3 711 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 RABL2AQ9UBK7 228 aaPredicted RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 EXTL2Q9UBQ6 330 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 RPS6KB2Q9UBS0 482 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 IL20RAQ9UHF4 553 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 KCNE5Q9UJ90 142 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 FBXL7Q9UJT9 491 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 SERTAD3Q9UJW9 196 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 POMT2Q9UKY4 750 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 NDRG2Q9UN36 371 aaKnown RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 RABL2BQ9UNT1 228 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 MRPS33Q9Y291 106 aaKnown RBP4.52□□□□□ -1.69
SF3B6-202ENST00000478050 NOX1Q9Y5S8 564 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 ITPR3Q14573 2671 aa4.52□□□□□ -1.69
SF3B6-202ENST00000478050 SPEGQ15772 3267 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 TRAV27A0A087WT01 109 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 TRAV1-2A0A0B4J238 106 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 C2orf92A0A1B0GVN3 265 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 FAM240BA0A1B0GVZ2 78 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 TCRBV21S2A2A0A5A6 115 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 EFCAB7A8K855 629 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 NPIPB9F8W1W9 429 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 OGG1O15527 345 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 ORC5O43913 435 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 SRPX2O60687 465 aaPredicted RBP4.51□□□□□ -1.69
SF3B6-202ENST00000478050 PRAMEF2O60811 474 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 CTNSO60931 367 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 LRP3O75074 770 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 TMEM127O75204 238 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 RDH16O75452 317 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 REM1O75628 298 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 NCR1O76036 304 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 NDUFB2O95178 105 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 IGLV3-19P01714 112 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 CD1AP06126 327 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 OR2T7P0C7T2 308 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 CHRNB1P11230 501 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 CTSEP14091 401 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 GABRG2P18507 467 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 NPR2P20594 1047 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 PTNP21246 168 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 SHC1P29353 583 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 GALNSP34059 522 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 ACAA2P42765 397 aaKnown RBP4.51□□□□□ -1.69
SF3B6-202ENST00000478050 RFX3P48380 749 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 EMDP50402 254 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 BLKP51451 505 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 MECP2P51608 486 aaKnown RBP4.51□□□□□ -1.69
SF3B6-202ENST00000478050 GBX2P52951 348 aaPredicted RBP4.51□□□□□ -1.69
SF3B6-202ENST00000478050 NKX2-5P52952 324 aaPredicted RBP4.51□□□□□ -1.69
SF3B6-202ENST00000478050 SLC16A1P53985 500 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 ATP12AP54707 1039 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 NRG3P56975 720 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 BTG1P62324 171 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 ACTA2P62736 377 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 ACTG2P63267 376 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 IGLV3-21P80748 117 aaPredicted RBP4.51□□□□□ -1.69
SF3B6-202ENST00000478050 IFITM2Q01629 132 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF85Q03923 595 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 HSF2Q03933 536 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 STX4Q12846 297 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 FAPQ12884 760 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 EIF2B5Q13144 721 aaKnown RBP4.51□□□□□ -1.69
SF3B6-202ENST00000478050 BIKQ13323 160 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 CRMP1Q14194 572 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 GGTLC2Q14390 218 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 CDK10Q15131 360 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 P2RY14Q15391 338 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 SF3B4Q15427 424 aaKnown RBP eCLIP4.51□□□□□ -1.69
SF3B6-202ENST00000478050 TESK1Q15569 626 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 ISXQ2M1V0 245 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 PRTGQ2VWP7 1150 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 ALG10BQ5I7T1 473 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 SLC35D3Q5M8T2 416 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 IDNKQ5T6J7 187 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 ZNF57Q68EA5 555 aaPredicted RBP4.51□□□□□ -1.69
SF3B6-202ENST00000478050 KIAA0895LQ68EN5 471 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 BICRALQ6AI39 1079 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 DMKNQ6E0U4 476 aaPredicted RBP4.51□□□□□ -1.69
SF3B6-202ENST00000478050 FAAH2Q6GMR7 532 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 PYHIN1Q6K0P9 492 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 SFXN4Q6P4A7 337 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 ULK3Q6PHR2 472 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 ARL9Q6T311 187 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 BAIAP2L2Q6UXY1 529 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 TRILQ7L0X0 811 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 PRSS41Q7RTY9 318 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 TAF8Q7Z7C8 310 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 OAFQ86UD1 273 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 NOXA1Q86UR1 476 aa4.51□□□□□ -1.69
SF3B6-202ENST00000478050 LIX1LQ8IVB5 337 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms