RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 EIF5AL1Q6IS14 154 aaKnown RBP13.43□□□□□ -0.26
HDAC6-220ENST00000477528 CCDC28AQ8IWP9 274 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 CRIPAKQ8N1N5 446 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 FRMD1Q8N878 549 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 OR5J2Q8NH18 312 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 PDCD1LG2Q9BQ51 273 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 HPF1Q9NWY4 346 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 PTTG3PQ9NZH4 202 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 TRPM6Q9BX84 2022 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 TEX13DA0A0J9YY54 714 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-220ENST00000477528 K7EQS6 105 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 SULT2B1O00204 365 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 NKX2-2O95096 273 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 CRYBB2P43320 205 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 SCRN3Q0VDG4 424 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 ATXN7L3Q14CW9 347 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-220ENST00000477528 APOOLQ6UXV4 268 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 TMEM43Q9BTV4 400 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 PHF7Q9BWX1 381 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-220ENST00000477528 NRSN2Q9GZP1 204 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 TRAPPC4Q9Y296 219 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 GJE1A6NN92 205 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 SC5DO75845 299 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 EEF1A2Q05639 463 aaKnown RBP13.43□□□□□ -0.26
HDAC6-220ENST00000477528 TMPRSS11FQ6ZWK6 438 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 GLB1L2Q8IW92 636 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 SPERTQ8NA61 448 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 ACOXLQ9NUZ1 547 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 FBXO9Q9UK97 447 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-220ENST00000477528 CHST2Q9Y4C5 530 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 TET1Q8NFU7 2136 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 PEX14O75381 377 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 RAB3AP20336 220 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 FGF9P31371 208 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-220ENST00000477528 MVDP53602 400 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 HTR4Q13639 388 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 FGL2Q14314 439 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 CHRFAM7AQ494W8 412 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 NDUFAF7Q7L592 441 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 SIAH3Q8IW03 269 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 ETV7Q9Y603 341 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 RNF215Q9Y6U7 377 aa13.43□□□□□ -0.26
HDAC6-220ENST00000477528 MN1Q10571 1320 aaPredicted RBP13.43□□□□□ -0.26
HDAC6-220ENST00000477528 TCRBP04435 133 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 CSF3P09919 207 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 PSMB1P20618 241 aaKnown RBP13.42□□□□□ -0.26
HDAC6-220ENST00000477528 LRRC37A5PQ49AS3 106 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 TCEAL2Q9H3H9 227 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-220ENST00000477528 ISG20L2Q9H9L3 353 aaKnown RBP13.42□□□□□ -0.26
HDAC6-220ENST00000477528 SEMG1P04279 462 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 TP53P04637 393 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-220ENST00000477528 AMY2BP19961 511 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 OR4D11Q8NGI4 311 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 GIMAP1Q8WWP7 306 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 MVB12AQ96EY5 273 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 ELF4Q99607 663 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-220ENST00000477528 ZNF471Q9BX82 626 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-220ENST00000477528 HCAR1Q9BXC0 346 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 ZNF736B4DX44 427 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-220ENST00000477528 SRFP11831 508 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 SLC2A5P22732 501 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 DCDP81605 110 aaKnown RBP13.42□□□□□ -0.26
HDAC6-220ENST00000477528 KCNAB1Q14722 419 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 YOD1Q5VVQ6 348 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-220ENST00000477528 FAM198BQ6UWH4 519 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 KIRREL2Q6UWL6 708 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 SIRT6Q8N6T7 355 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 BEST4Q8NFU0 473 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 OR5D14Q8NGL3 314 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 COQ8AQ8NI60 647 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 NEURL2Q9BR09 285 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 SLC6A15Q9H2J7 730 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 MYEF2Q9P2K5 600 aaKnown RBP13.42□□□□□ -0.26
HDAC6-220ENST00000477528 IGHG1P01857 330 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 NPR2P20594 1047 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 CD34P28906 385 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 HOXC12P31275 282 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 SQSTM1Q13501 440 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 PLEKHN1Q494U1 663 aaPredicted RBP13.42□□□□□ -0.26
HDAC6-220ENST00000477528 EMC4Q5J8M3 183 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 NKAPLQ5M9Q1 402 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 GRINAQ7Z429 371 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 GPBAR1Q8TDU6 330 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 HLA-CQ95604 372 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 NIPAL2Q9H841 368 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 ALKBH4Q9NXW9 302 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 FBXL3Q9UKT7 428 aa13.42□□□□□ -0.26
HDAC6-220ENST00000477528 EXO1Q9UQ84 846 aaKnown RBP13.42□□□□□ -0.26
HDAC6-220ENST00000477528 NYNRINQ9P2P1 1898 aaKnown RBP13.41□□□□□ -0.26
HDAC6-220ENST00000477528 C2CD4DB7Z1M9 353 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 SDHAP31040 664 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 GLP1RP43220 463 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 HCCSP53701 268 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 BTG1P62324 171 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 C1orf140Q5VVS0 124 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 PAPD4Q6PIY7 484 aaKnown RBP13.41□□□□□ -0.26
HDAC6-220ENST00000477528 SPRED2Q7Z698 418 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 CCDC71Q8IV32 467 aaPredicted RBP13.41□□□□□ -0.26
HDAC6-220ENST00000477528 PM20D2Q8IYS1 436 aa13.41□□□□□ -0.26
HDAC6-220ENST00000477528 POGLUT1Q8NBL1 392 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms