RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 GRNP28799 593 aaKnown RBP11.63□□□□□ -0.55
TOP3A-205ENST00000477508 IFNGR2P38484 337 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 SLC9A3P48764 834 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 SPIBQ01892 262 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 FOXD4Q12950 439 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-205ENST00000477508 GK3PQ14409 553 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 TAF11Q15544 211 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 EXOC3L2Q2M3D2 409 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 MS4A18Q3C1V0 323 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 FBXW9Q5XUX1 488 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 PODNL1Q6PEZ8 512 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 MEX3BQ6ZN04 569 aaKnown RBP11.63□□□□□ -0.55
TOP3A-205ENST00000477508 TMPRSS11FQ6ZWK6 438 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 ASRGL1Q7L266 308 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 SLC46A3Q7Z3Q1 461 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 NANOGNBQ7Z5D8 188 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 ABHD12BQ7Z5M8 362 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-205ENST00000477508 EPHX4Q8IUS5 362 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 NRMQ8IXM6 262 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 LINC00471Q8N535 108 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 ZIC4Q8N9L1 334 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 POMGNT2Q8NAT1 580 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 ANKK1Q8NFD2 765 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 REPIN1Q9BWE0 567 aaKnown RBP11.63□□□□□ -0.55
TOP3A-205ENST00000477508 NDEL1Q9GZM8 345 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 OR10A4Q9H209 315 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 B3GAT1Q9P2W7 334 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 GPR52Q9Y2T5 361 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 TESMINQ9Y4I5 508 aa11.63□□□□□ -0.55
TOP3A-205ENST00000477508 FREM1Q5H8C1 2179 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 ANKHD1Q8IWZ3 2542 aaKnown RBP11.62□□□□□ -0.55
TOP3A-205ENST00000477508 TCRBV3S1A0A5B6 114 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 TUBAL3A6NHL2 446 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 EFCAB9A8MZ26 197 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 C19orf84I3L1E1 186 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 CIB2O75838 187 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 SAGP10523 405 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-205ENST00000477508 PPP3CBP16298 524 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 PSMB1P20618 241 aaKnown RBP11.62□□□□□ -0.55
TOP3A-205ENST00000477508 AHCYP23526 432 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 RRM2P31350 389 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 UGT2B10P36537 528 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 KIR2DL3P43628 341 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 HMGA2P52926 109 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 ITGADQ13349 1161 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 SSX8Q7RTT4 187 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 ADGRG5Q8IZF4 528 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 GABRG1Q8N1C3 465 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 UBE2J2Q8N2K1 259 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 KDM8Q8N371 416 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 LRRC17Q8N6Y2 441 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 STEAP2Q8NFT2 490 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 FAM222BQ8WU58 562 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 ZNF385AQ96PM9 386 aaKnown RBP11.62□□□□□ -0.55
TOP3A-205ENST00000477508 ALPK1Q96QP1 1244 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 C20orf141Q9NUB4 165 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 ASB6Q9NWX5 421 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 TAS2R5Q9NYW4 299 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 UPB1Q9UBR1 384 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 SEC14L4Q9UDX3 406 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 MALT1Q9UDY8 824 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 KCNN3Q9UGI6 736 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 AURKCQ9UQB9 309 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 PKDREJQ9NTG1 2253 aa11.62□□□□□ -0.55
TOP3A-205ENST00000477508 TRBV4-1A0A0J9YWV2 114 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 SH3PXD2BA1X283 911 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 NPIPB13A6NJU9 1138 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 ZNF726A6NNF4 738 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 NPIPB4C9JG80 1138 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 BLOC1S5-TXNDC5H3BN57 136 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 RNF13O43567 381 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 TRAF3IP2O43734 574 aaPredicted RBP11.61□□□□□ -0.55
TOP3A-205ENST00000477508 SLC43A1O75387 559 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 TSPAN19P0C672 248 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 NTF4P34130 210 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 CLDN17P56750 224 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 POU3F1Q03052 451 aaPredicted RBP11.61□□□□□ -0.55
TOP3A-205ENST00000477508 TGFBR3Q03167 851 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 FAM27E3Q08E93 113 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 C1QTNF12Q5T7M4 302 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 C1orf146Q5VVC0 180 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 OR2T5Q6IEZ7 315 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 STAC2Q6ZMT1 411 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 HDDC2Q7Z4H3 204 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 YTHDF3Q7Z739 585 aaKnown RBP11.61□□□□□ -0.55
TOP3A-205ENST00000477508 OAFQ86UD1 273 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 OR4K5Q8NGD3 323 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 OR2T29Q8NH02 315 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 OR52J3Q8NH60 311 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 CANT1Q8WVQ1 401 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 ADAD1Q96M93 576 aaKnown RBP11.61□□□□□ -0.55
TOP3A-205ENST00000477508 DACH2Q96NX9 599 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 KCNK17Q96T54 332 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 FUZQ9BT04 418 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 CHID1Q9BWS9 393 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 LINC00470Q9BZP3 86 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 SLCO5A1Q9H2Y9 848 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 REEP1Q9H902 201 aa11.61□□□□□ -0.55
TOP3A-205ENST00000477508 STX18Q9P2W9 335 aaKnown RBP11.61□□□□□ -0.55
TOP3A-205ENST00000477508 HIF3AQ9Y2N7 669 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms