RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 SNRNP200O75643 2136 aaKnown RBP3.25□□□□□ -1.89
UBR3-209ENST00000477461 REV3LO60673 3130 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 LOC105371242A0A075B767 164 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 A0A0J9YY10 115 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 KRT87PA6NCN2 255 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 TMEM114B3SHH9 223 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 NPIPA3F8WFD2 350 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 K7EPI3 171 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 CDX4O14627 284 aaPredicted RBP3.25□□□□□ -1.89
UBR3-209ENST00000477461 SLC30A4O14863 429 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 TAPBPO15533 448 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 PRAF2O60831 178 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 FCGR3BO75015 233 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 CLDN9O95484 217 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 OTCP00480 354 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 IGKV3-15P01624 115 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 RPLP0P05388 317 aaKnown RBP3.25□□□□□ -1.89
UBR3-209ENST00000477461 VIMP08670 466 aaKnown RBP3.25□□□□□ -1.89
UBR3-209ENST00000477461 RPS17P08708 135 aaKnown RBP3.25□□□□□ -1.89
UBR3-209ENST00000477461 FAM58BPP0C7Q3 252 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 UGT2B7P16662 529 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 BGNP21810 368 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 AADACP22760 399 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 HMOX2P30519 316 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 SERPINB5P36952 375 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 MDH1P40925 334 aaKnown RBP3.25□□□□□ -1.89
UBR3-209ENST00000477461 CAPZBP47756 277 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 SLC1A6P48664 564 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 CCR8P51685 355 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 PKNOX1P55347 436 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 TMEM50BP56557 158 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 DNAJB13P59910 316 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 ABCE1P61221 599 aaKnown RBP3.25□□□□□ -1.89
UBR3-209ENST00000477461 IRF8Q02556 426 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 LCP2Q13094 533 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 CHIT1Q13231 466 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 RCN2Q14257 317 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 FASTKQ14296 549 aaKnown RBP3.25□□□□□ -1.89
UBR3-209ENST00000477461 GRB7Q14451 532 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 SLC5A12Q1EHB4 618 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 C18orf21Q32NC0 220 aaPredicted RBP3.25□□□□□ -1.89
UBR3-209ENST00000477461 MOGAT2Q3SYC2 334 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 UNC50Q53HI1 259 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 FBXO48Q5FWF7 155 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 PAGE2BQ5JRK9 111 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 ZNF678Q5SXM1 525 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 TTC19Q6DKK2 380 aaPredicted RBP3.25□□□□□ -1.89
UBR3-209ENST00000477461 HIST2H2AA3Q6FI13 130 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 GUSBP11Q6P575 273 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 ZCCHC23Q6ZST2 131 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 GOLGA7Q7Z5G4 137 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 C17orf82Q86X59 251 aaPredicted RBP3.25□□□□□ -1.89
UBR3-209ENST00000477461 CATSPERDQ86XM0 798 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 CRLF3Q8IUI8 442 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 GBP7Q8N8V2 638 aaPredicted RBP3.25□□□□□ -1.89
UBR3-209ENST00000477461 AQP11Q8NBQ7 271 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 NUP37Q8NFH4 326 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 CKAP2Q8WWK9 683 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 SLC5A11Q8WWX8 675 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 ZNF75CPQ92670 426 aaPredicted RBP3.25□□□□□ -1.89
UBR3-209ENST00000477461 N4BP2L2Q92802 583 aaPredicted RBP3.25□□□□□ -1.89
UBR3-209ENST00000477461 UBE2E3Q969T4 207 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 ESAMQ96AP7 390 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 L3HYPDHQ96EM0 354 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 MAGEB18Q96M61 343 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 GBP5Q96PP8 586 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 TMEM237Q96Q45 408 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 AIF1LQ9BQI0 150 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 TBC1D10AQ9BXI6 508 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 ILKAPQ9H0C8 392 aaPredicted RBP3.25□□□□□ -1.89
UBR3-209ENST00000477461 NSRP1Q9H0G5 558 aaKnown RBP3.25□□□□□ -1.89
UBR3-209ENST00000477461 MID1IP1Q9NPA3 183 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 SOHLH2Q9NX45 425 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 CHCHD3Q9NX63 227 aaKnown RBP3.25□□□□□ -1.89
UBR3-209ENST00000477461 NDE1Q9NXR1 346 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 PTBP2Q9UKA9 531 aaKnown RBP3.25□□□□□ -1.89
UBR3-209ENST00000477461 PCTPQ9UKL6 214 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 SLC22A14Q9Y267 594 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 FIS1Q9Y3D6 152 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 C5orf42Q9H799 3197 aa3.25□□□□□ -1.89
UBR3-209ENST00000477461 COL5A1P20908 1838 aaPredicted RBP3.25□□□□□ -1.89
UBR3-209ENST00000477461 MDC1Q14676 2089 aaKnown RBP3.24□□□□□ -1.89
UBR3-209ENST00000477461 ASXL3Q9C0F0 2248 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 IGHV1OR21-1A0A087WYE8 117 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 A0A1W2PPR1 153 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 TLCD2A6NGC4 264 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 ANKDD1BA6NHY2 528 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 NKX6-3A6NJ46 265 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 PCNX2A6NKB5 2137 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 TCP11X1B4DZS4 312 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 CCL24O00175 119 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 BTN3A3O00478 584 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 E2F3O00716 465 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 AZIN1O14977 448 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 B4GAT1O43505 415 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 LYPLA1O75608 230 aaPredicted RBP3.24□□□□□ -1.89
UBR3-209ENST00000477461 OR4F21O95013 312 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 CPNE6O95741 557 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 IGHEP01854 428 aa3.24□□□□□ -1.89
UBR3-209ENST00000477461 KRT6AP02538 564 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms