RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 SLC2A5P22732 501 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 ITGA3P26006 1051 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 PEBP1P30086 187 aaKnown RBP10.12□□□□□ -0.79
COL27A1-204ENST00000477421 PRSS3P35030 304 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 HSD11B2P80365 405 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 NKAPLQ5M9Q1 402 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 SLC22A10Q63ZE4 541 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 KIAA0907Q7Z7F0 614 aaPredicted RBP10.12□□□□□ -0.79
COL27A1-204ENST00000477421 CCDC190Q86UF4 302 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 ZNF584Q8IVC4 421 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 SLC7A6Q92536 515 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 CREB3L1Q96BA8 519 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 TRMT61AQ96FX7 289 aaKnown RBP10.12□□□□□ -0.79
COL27A1-204ENST00000477421 MSANTD3Q96H12 275 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 DERL3Q96Q80 235 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 MICU1Q9BPX6 476 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 ZNF717Q9BY31 904 aaPredicted RBP10.12□□□□□ -0.79
COL27A1-204ENST00000477421 SRRQ9GZT4 340 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 LIN7BQ9HAP6 207 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 C2orf42Q9NWW7 574 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 VSX1Q9NZR4 365 aaPredicted RBP10.12□□□□□ -0.79
COL27A1-204ENST00000477421 NEUROG3Q9Y4Z2 214 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 TTC28Q96AY4 2481 aa10.12□□□□□ -0.79
COL27A1-204ENST00000477421 TMEM269A0A1B0GVZ9 245 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 A0A1W2PPC4 97 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 IDSB3KWA1 339 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 C4orf51C9J302 202 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 SUSD5O60279 629 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 BRINP1O60477 761 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 DPM1O60762 260 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 FOSL1P15407 271 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 ZNF43P17038 809 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 HTR3AP46098 478 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 MTNR1BP49286 362 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 DGCR2P98153 550 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 C16orf47Q6ZP98 133 aaPredicted RBP10.11□□□□□ -0.79
COL27A1-204ENST00000477421 OR2L13Q8N349 312 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 PLPP7Q8NBV4 271 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 TMEM52Q8NDY8 209 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 OR5M1Q8NGP8 315 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 ELMOD3Q96FG2 381 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 OR6C1Q96RD1 312 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 RBM24Q9BX46 236 aaKnown RBP10.11□□□□□ -0.79
COL27A1-204ENST00000477421 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.11□□□□□ -0.79
COL27A1-204ENST00000477421 SCP2D1Q9UJQ7 156 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 B4DXG7 233 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 TEX46H3BTG2 121 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 LALBAP00709 142 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 ALDOBP05062 364 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 UQCRC1P31930 480 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 FOXL2P58012 376 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 CCDC58Q4VC31 144 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 CD163Q86VB7 1156 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 MCEMP1Q8IX19 187 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 C8orf44Q96CB5 159 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 LRRC61Q9BV99 259 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 SLC25A19Q9HC21 320 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 CHMP1AQ9HD42 196 aaPredicted RBP10.11□□□□□ -0.79
COL27A1-204ENST00000477421 C19orf25Q9UFG5 118 aaPredicted RBP10.11□□□□□ -0.79
COL27A1-204ENST00000477421 TFP02787 698 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 CSTBP04080 98 aaKnown RBP10.11□□□□□ -0.79
COL27A1-204ENST00000477421 SLC2A1P11166 492 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 OTX2P32243 289 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 EVX1P49640 407 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 MNX1P50219 401 aaPredicted RBP10.11□□□□□ -0.79
COL27A1-204ENST00000477421 TEKQ02763 1124 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 RASGEF1BQ0VAM2 473 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 GPR176Q14439 515 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 MLC1Q15049 377 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 FCRL6Q6DN72 434 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 TSSK4Q6SA08 328 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 LRRC69Q6ZNQ3 347 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 TSEN54Q7Z6J9 526 aaKnown RBP10.11□□□□□ -0.79
COL27A1-204ENST00000477421 SLC35F3Q8IY50 421 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 PNLDC1Q8NA58 520 aaKnown RBP10.11□□□□□ -0.79
COL27A1-204ENST00000477421 CCDC107Q8WV48 283 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 GIMAP1Q8WWP7 306 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 ZNF350Q9GZX5 532 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 METTL17Q9H7H0 456 aaPredicted RBP10.11□□□□□ -0.79
COL27A1-204ENST00000477421 INPP5EQ9NRR6 644 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 KCND3Q9UK17 655 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 DKKL1Q9UK85 242 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 VWA8A3KMH1 1905 aa10.11□□□□□ -0.79
COL27A1-204ENST00000477421 A0A1W2PQF6 199 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 EFCAB7A8K855 629 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 SYT7O43581 403 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 OR2T1O43869 369 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 AKR1C4P17516 323 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 SPI1P17947 270 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 LTBQ06643 244 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 CAMK2DQ13557 499 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 ZIC1Q15915 447 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 CBLN3Q6UW01 205 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 NDUFAF7Q7L592 441 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 TPRA1Q86W33 373 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 MORN4Q8NDC4 146 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 C17orf47Q8NEP4 570 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 DVL3Q92997 716 aaPredicted RBP10.1□□□□□ -0.79
COL27A1-204ENST00000477421 ARHGDIGQ99819 225 aa10.1□□□□□ -0.79
COL27A1-204ENST00000477421 BARHL1Q9BZE3 327 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms