RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 C3orf33Q6P1S2 294 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 SMRP1Q8NCR6 262 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 C7orf57Q8NEG2 295 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 ELP5Q8TE02 316 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 TCEAL3Q969E4 200 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 C16orf58Q96GQ5 468 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 TCEAL7Q9BRU2 100 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 FAM117AQ9C073 453 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 MTHFD2LQ9H903 347 aaPredicted RBP13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 ZNF629Q9UEG4 869 aaPredicted RBP13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 ICAM5Q9UMF0 924 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 TNFSF18Q9UNG2 199 aa13.99□□□□□ -0.17
CLSTN1-205ENST00000477264 TMEM272A0A1B0GTI8 110 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 TBC1D3BA6NDS4 549 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 PRRT4C9JH25 899 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 FOLR2P14207 255 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 TIMP2P16035 220 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 UBE2IP63279 158 aaKnown RBP13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 OC90Q02509 493 aaPredicted RBP13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 SLC9A5Q14940 896 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 FNDC3BQ53EP0 1204 aaKnown RBP13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 FAM74A1Q5RGS3 127 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 ZNF836Q6ZNA1 936 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 FRRS1Q6ZNA5 592 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 SLC35F2Q8IXU6 374 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 OR14A16Q8NHC5 309 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 SNX33Q8WV41 574 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 IL17FQ96PD4 163 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 GAS2L1Q99501 681 aaPredicted RBP13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 ZNF281Q9Y2X9 895 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 OR6C74A6NCV1 312 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 SIGLEC5O15389 551 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 XRCC3O43542 346 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 S100A6P06703 90 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 ELFN1P0C7U0 828 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 ACHEP22303 614 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 SLC6A6P31641 620 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 LUMP51884 338 aaPredicted RBP13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 ZNF136P52737 540 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 SIGLEC14Q08ET2 396 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 ITPRIPL2Q3MIP1 535 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 C9orf64Q5T6V5 341 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 BEST3Q8N1M1 668 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 OR1J4Q8NGS1 313 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 NXPE3Q969Y0 559 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 POT1Q9NUX5 634 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 SPHK1Q9NYA1 384 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 IL36AQ9UHA7 158 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 CD207Q9UJ71 328 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 PCDHB10Q9UN67 800 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 ASF1AQ9Y294 204 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 PRKAB1Q9Y478 270 aa13.98□□□□□ -0.17
CLSTN1-205ENST00000477264 LRRK1Q38SD2 2015 aa13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 LINC00587B1AMM8 73 aa13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 PIN1P1O15428 100 aa13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 GATCO43716 136 aaKnown RBP13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 ERAL1O75616 437 aaKnown RBP13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 MPIP34949 423 aa13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 PSMD4P55036 377 aaKnown RBP13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 TNFRSF17Q02223 184 aa13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 MESP2Q0VG99 397 aa13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 SERTAD2Q14140 314 aa13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 GUCA2BQ16661 112 aa13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 C4orf46Q504U0 113 aa13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 ZNF704Q6ZNC4 412 aaPredicted RBP13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 ZNF600Q6ZNG1 722 aa13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 ZNF433Q8N7K0 673 aaPredicted RBP13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 OR2L2Q8NH16 312 aa13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 THAP6Q8TBB0 222 aa13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 ADAMTS15Q8TE58 950 aa13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 ARL11Q969Q4 196 aa13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 LRIG1Q96JA1 1093 aa13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 MS4A4EQ96PG1 132 aa13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 SMAD5Q99717 465 aaKnown RBP13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 PRSS16Q9NQE7 514 aa13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 COMMD9Q9P000 198 aa13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 MED31Q9Y3C7 131 aa13.97□□□□□ -0.17
CLSTN1-205ENST00000477264 LEFTY1O75610 366 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 SPP1P10451 314 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 PAX6P26367 422 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 NDUFS1P28331 727 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 FNTBP49356 437 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 RGS19P49795 217 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 PDX1P52945 283 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 HCCSP53701 268 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 RAB5BP61020 215 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 EEF1A1P68104 462 aaKnown RBP13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 DUSP8Q13202 625 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 COL19A1Q14993 1142 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 CEBPEQ15744 281 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 MANEAQ5SRI9 462 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 TMEM88Q6PEY1 159 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 THSD4Q6ZMP0 1018 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 SLC35F3Q8IY50 421 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 OR13C2Q8NGS9 318 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 ZG16BQ96DA0 208 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 BPIFA2Q96DR5 249 aa13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 CNRIP1Q96F85 164 aaPredicted RBP13.96□□□□□ -0.17
CLSTN1-205ENST00000477264 RPP25Q9BUL9 199 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms