RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 TYW3Q6IPR3 259 aaKnown RBP6.35□□□□□ -1.39
BRCA1-214ENST00000477152 C11orf71Q6IPW1 123 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 AAED1Q7RTV5 226 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 CROCCP2Q86T23 111 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 KRTCAP2Q8N6L1 136 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 LINC00482Q8N8I6 264 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 FAM71CQ8NEG0 241 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 OR4F15Q8NGB8 312 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 C10orf105Q8TEF2 133 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 WDR60Q8WVS4 1066 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 NRG4Q8WWG1 115 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 ZNF75CPQ92670 426 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-214ENST00000477152 TMEM45BQ96B21 275 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 NEURL3Q96EH8 262 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 TRNT1Q96Q11 434 aaKnown RBP6.35□□□□□ -1.39
BRCA1-214ENST00000477152 ING1Q9UK53 422 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-214ENST00000477152 TMED7Q9Y3B3 224 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 JMJD1CQ15652 2540 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 ZNF469Q96JG9 3925 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-214ENST00000477152 CSPG4Q6UVK1 2322 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 LOC390937A0A1W2PQ73 354 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 CFAP73A6NFT4 308 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 B9A039 149 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 ZNF587BE7ETH6 402 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 BIRC5O15392 142 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 FCMRO60667 390 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 SCN2BO60939 215 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 IGHV3-9P01782 118 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 VIMP08670 466 aaKnown RBP6.35□□□□□ -1.39
BRCA1-214ENST00000477152 NR2F1P10589 423 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 APEHP13798 732 aaKnown RBP6.35□□□□□ -1.39
BRCA1-214ENST00000477152 LBPP18428 481 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 RPL14P50914 215 aaKnown RBP6.35□□□□□ -1.39
BRCA1-214ENST00000477152 MALLQ13021 153 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 OTUD3Q5T2D3 398 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-214ENST00000477152 TNFAIP8L2Q6P589 184 aaPredicted RBP6.35□□□□□ -1.39
BRCA1-214ENST00000477152 LRRC74BQ6ZQY2 392 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 SLC46A3Q7Z3Q1 461 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 SNX32Q86XE0 403 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 CCDC36Q8IYA8 594 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 IL17RDQ8NFM7 739 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 RAB24Q969Q5 203 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 PANX1Q96RD7 426 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 SLC35A5Q9BS91 424 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 KATNB1Q9BVA0 655 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 C12orf65Q9H3J6 166 aaKnown RBP6.35□□□□□ -1.39
BRCA1-214ENST00000477152 NPAP1Q9NZP6 1156 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 LGALS13Q9UHV8 139 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 ZDHHC2Q9UIJ5 367 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 BTNL2Q9UIR0 455 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 RAP2CQ9Y3L5 183 aa6.35□□□□□ -1.39
BRCA1-214ENST00000477152 ABCA1O95477 2261 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 CCDC154A6NI56 674 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 NDUFS7O75251 213 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 SPAG7O75391 227 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 SERPINE1P05121 402 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 CCNA2P20248 432 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 ABCE1P61221 599 aaKnown RBP6.34□□□□□ -1.39
BRCA1-214ENST00000477152 LARS2Q15031 903 aaKnown RBP6.34□□□□□ -1.39
BRCA1-214ENST00000477152 LIN52Q52LA3 116 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 SAXO2Q658L1 398 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 REP15Q6BDI9 236 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 WBP2NLQ6ICG8 309 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 EMBQ6PCB8 327 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 ZCCHC23Q6ZST2 131 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 ADGRG3Q86Y34 549 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 PHC2Q8IXK0 858 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 CLECL1Q8IZS7 167 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 TEX29Q8N6K0 151 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 ZNF525Q8N782 197 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 PPP1R35Q8TAP8 253 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 NEU4Q8WWR8 484 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-214ENST00000477152 FBXO17Q96EF6 278 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 BOD1Q96IK1 185 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 C3orf30Q96M34 536 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 VRK1Q99986 396 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-214ENST00000477152 MECRQ9BV79 373 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 SLC17A7Q9P2U7 560 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 RASD1Q9Y272 281 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 FLVCR1Q9Y5Y0 555 aa6.34□□□□□ -1.39
BRCA1-214ENST00000477152 A8MVM7 634 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 E9PBE3 544 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 TM9SF1O15321 606 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 ENTPD5O75356 428 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 ANP32DO95626 131 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 NCF2P19878 526 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-214ENST00000477152 TACR3P29371 465 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 SERPINF1P36955 418 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 CHN2P52757 468 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 H3F3AP84243 136 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 GGTLC2Q14390 218 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 SLC17A1Q14916 467 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 PDCD2Q16342 344 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-214ENST00000477152 CARTPTQ16568 116 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 PDCD4Q53EL6 469 aaKnown RBP6.33□□□□□ -1.4
BRCA1-214ENST00000477152 C5orf46Q6UWT4 87 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 FRRS1Q6ZNA5 592 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 SPATA19Q7Z5L4 167 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 GPAT4Q86UL3 456 aa6.33□□□□□ -1.4
BRCA1-214ENST00000477152 GSPT2Q8IYD1 628 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms