RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ANKFN1Q8N957 763 aa9.72□□□□□ -0.85
BRCA1-213ENST00000476777 OR8J2Q8NGG1 315 aa9.72□□□□□ -0.85
BRCA1-213ENST00000476777 AGR3Q8TD06 166 aa9.72□□□□□ -0.85
BRCA1-213ENST00000476777 LRRC58Q96CX6 371 aa9.72□□□□□ -0.85
BRCA1-213ENST00000476777 NEURL3Q96EH8 262 aa9.72□□□□□ -0.85
BRCA1-213ENST00000476777 ZNF75AQ96N20 296 aa9.72□□□□□ -0.85
BRCA1-213ENST00000476777 TRNT1Q96Q11 434 aaKnown RBP9.72□□□□□ -0.85
BRCA1-213ENST00000476777 C1QTNF5Q9BXJ0 243 aa9.72□□□□□ -0.85
BRCA1-213ENST00000476777 SLC38A1Q9H2H9 487 aa9.72□□□□□ -0.85
BRCA1-213ENST00000476777 B3GAT1Q9P2W7 334 aa9.72□□□□□ -0.85
BRCA1-213ENST00000476777 OPN4Q9UHM6 478 aa9.72□□□□□ -0.85
BRCA1-213ENST00000476777 FZR1Q9UM11 496 aa9.72□□□□□ -0.85
BRCA1-213ENST00000476777 ZNF99A8MXY4 864 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-213ENST00000476777 FTCDNL1E5RQL4 147 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 COPEO14579 308 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 NPHS1O60500 1241 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 SLC43A1O75387 559 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 CPSF4O95639 269 aaKnown RBP9.71□□□□□ -0.86
BRCA1-213ENST00000476777 C1QCP02747 245 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 TFPTP0C1Z6 253 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 GKN3PP0CG01 181 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 PNMTP11086 282 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 IL7RP16871 459 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 ZNF14P17017 642 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-213ENST00000476777 ZNF43P17038 809 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 PRTN3P24158 256 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 FPR2P25090 351 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 MAGEB1P43366 347 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 MVKQ03426 396 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 AVPI1Q5T686 147 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 DCAF12L2Q5VW00 463 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 GPR137CQ8N3F9 429 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 C17orf53Q8N3J3 647 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-213ENST00000476777 CADM2Q8N3J6 435 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 KIF18AQ8NI77 898 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 ZNF385DQ9H6B1 395 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 C7orf69Q9H7B7 122 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 MTHFD2LQ9H903 347 aaPredicted RBP9.71□□□□□ -0.86
BRCA1-213ENST00000476777 RLIMQ9NVW2 624 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 ARMCX1Q9P291 453 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 NOX1Q9Y5S8 564 aa9.71□□□□□ -0.86
BRCA1-213ENST00000476777 PRSS51A0A1B0GVH4 220 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 CDHR4A6H8M9 788 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 CDC14BO60729 498 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 IGHV2-5P01817 119 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 CD79AP11912 226 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 KRT4P19013 534 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 ZFP36P26651 326 aaKnown RBP9.7□□□□□ -0.86
BRCA1-213ENST00000476777 ARRB2P32121 409 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 RPS23P62266 143 aaKnown RBP9.7□□□□□ -0.86
BRCA1-213ENST00000476777 EMX2Q04743 252 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 GNA13Q14344 377 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 OCLNQ16625 522 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 GSG1Q2KHT4 349 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 TRMT5Q32P41 509 aaKnown RBP9.7□□□□□ -0.86
BRCA1-213ENST00000476777 PHYHD1Q5SRE7 291 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 GKAP1Q5VSY0 366 aaPredicted RBP9.7□□□□□ -0.86
BRCA1-213ENST00000476777 WBP2NLQ6ICG8 309 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 LRRC74BQ6ZQY2 392 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 RNF130Q86XS8 419 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 GSPT2Q8IYD1 628 aaKnown RBP9.7□□□□□ -0.86
BRCA1-213ENST00000476777 ZNF440Q8IYI8 595 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 SIGLECL1Q8N7X8 197 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 MFSD8Q8NHS3 518 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 TUBGCP3Q96CW5 907 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 RAB39BQ96DA2 213 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 C1orf147Q96MC9 270 aaPredicted RBP9.7□□□□□ -0.86
BRCA1-213ENST00000476777 OXGR1Q96P68 337 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 DUX5Q96PT3 197 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 OR2M2Q96R28 347 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 SLC35A5Q9BS91 424 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 PTDSS2Q9BVG9 487 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 TXLNGYQ9BZA5 131 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 GRPEL1Q9HAV7 217 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 ASIC5Q9NY37 505 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 SEC14L4Q9UDX3 406 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 MARCOQ9UEW3 520 aaPredicted RBP9.7□□□□□ -0.86
BRCA1-213ENST00000476777 DUSP13Q9UII6 198 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 MID2Q9UJV3 735 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 PRDM4Q9UKN5 801 aa9.7□□□□□ -0.86
BRCA1-213ENST00000476777 ZNF346Q9UL40 294 aaKnown RBP9.7□□□□□ -0.86
BRCA1-213ENST00000476777 A0A096LPI6 279 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 A0A1W2PPW3 197 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 DNAJC9-AS1A6NH13 148 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 POM121CA8CG34 1229 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 M0R3G1 203 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 AHSA1O95433 338 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 DBIP07108 87 aaKnown RBP9.69□□□□□ -0.86
BRCA1-213ENST00000476777 NUDT17P0C025 328 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 GATA3P23771 443 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 ALDH3A1P30838 453 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 CHI3L1P36222 383 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-213ENST00000476777 COPZ1P61923 177 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 IL13RA1P78552 427 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 CCL8P80075 99 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 EGR4Q05215 589 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 PIGFQ07326 219 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 MAD2L1Q13257 205 aaPredicted RBP9.69□□□□□ -0.86
BRCA1-213ENST00000476777 CASP8Q14790 479 aa9.69□□□□□ -0.86
BRCA1-213ENST00000476777 WHAMMP3Q1A5X7 153 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms