RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 FAM107BQ9H098 131 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 MYLK2Q9H1R3 596 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 MRPL39Q9NYK5 338 aaKnown RBP18.54■□□□□ 0.56
LIME1-204ENST00000476183 LAMP3Q9UQV4 416 aa18.54■□□□□ 0.56
LIME1-204ENST00000476183 OR6C65A6NJZ3 312 aa18.53■□□□□ 0.56
LIME1-204ENST00000476183 SHOX2O60902 331 aaPredicted RBP18.53■□□□□ 0.56
LIME1-204ENST00000476183 NQO1P15559 274 aaKnown RBP18.53■□□□□ 0.56
LIME1-204ENST00000476183 CD40P25942 277 aa18.53■□□□□ 0.56
LIME1-204ENST00000476183 KDELR2P33947 212 aa18.53■□□□□ 0.56
LIME1-204ENST00000476183 PTH2RP49190 550 aa18.53■□□□□ 0.56
LIME1-204ENST00000476183 PGGHGQ32M88 737 aa18.53■□□□□ 0.56
LIME1-204ENST00000476183 LRRC23Q53EV4 343 aaPredicted RBP18.53■□□□□ 0.56
LIME1-204ENST00000476183 CYBRD1Q53TN4 286 aa18.53■□□□□ 0.56
LIME1-204ENST00000476183 SHEQ5VZ18 495 aa18.53■□□□□ 0.56
LIME1-204ENST00000476183 C8orf82Q6P1X6 216 aaPredicted RBP18.53■□□□□ 0.56
LIME1-204ENST00000476183 ABHD12BQ7Z5M8 362 aaPredicted RBP18.53■□□□□ 0.56
LIME1-204ENST00000476183 WDFY1Q8IWB7 410 aa18.53■□□□□ 0.56
LIME1-204ENST00000476183 OR1K1Q8NGR3 316 aa18.53■□□□□ 0.56
LIME1-204ENST00000476183 TMEM171Q8WVE6 324 aa18.53■□□□□ 0.56
LIME1-204ENST00000476183 BOD1Q96IK1 185 aa18.53■□□□□ 0.56
LIME1-204ENST00000476183 OR2M2Q96R28 347 aa18.53■□□□□ 0.56
LIME1-204ENST00000476183 GSX2Q9BZM3 304 aa18.53■□□□□ 0.56
LIME1-204ENST00000476183 BAG5Q9UL15 447 aa18.53■□□□□ 0.56
LIME1-204ENST00000476183 AMDHD2Q9Y303 409 aa18.53■□□□□ 0.56
LIME1-204ENST00000476183 C2CD3Q4AC94 2353 aa18.53■□□□□ 0.56
LIME1-204ENST00000476183 ELOVL7A1L3X0 281 aa18.52■□□□□ 0.56
LIME1-204ENST00000476183 M0R1B8 84 aa18.52■□□□□ 0.56
LIME1-204ENST00000476183 PLPP3O14495 311 aa18.52■□□□□ 0.56
LIME1-204ENST00000476183 PAX1P15863 534 aa18.52■□□□□ 0.56
LIME1-204ENST00000476183 PTAFRP25105 342 aa18.52■□□□□ 0.56
LIME1-204ENST00000476183 LSP1P33241 339 aa18.52■□□□□ 0.56
LIME1-204ENST00000476183 OR1E2P47887 323 aa18.52■□□□□ 0.56
LIME1-204ENST00000476183 CDH11P55287 796 aa18.52■□□□□ 0.56
LIME1-204ENST00000476183 ROR2Q01974 943 aaKnown RBP18.52■□□□□ 0.56
LIME1-204ENST00000476183 PUDPQ08623 228 aa18.52■□□□□ 0.56
LIME1-204ENST00000476183 PMS2P3Q13401 168 aa18.52■□□□□ 0.56
LIME1-204ENST00000476183 KLHL17Q6TDP4 642 aa18.52■□□□□ 0.56
LIME1-204ENST00000476183 TMEM108Q6UXF1 575 aa18.52■□□□□ 0.56
LIME1-204ENST00000476183 ARPINQ7Z6K5 226 aa18.52■□□□□ 0.56
LIME1-204ENST00000476183 UEVLDQ8IX04 471 aa18.52■□□□□ 0.56
LIME1-204ENST00000476183 TMEM123Q8N131 208 aa18.52■□□□□ 0.56
LIME1-204ENST00000476183 SMAP2Q8WU79 429 aaPredicted RBP18.52■□□□□ 0.56
LIME1-204ENST00000476183 BCL2L2Q92843 193 aaPredicted RBP18.52■□□□□ 0.56
LIME1-204ENST00000476183 TXNDC15Q96J42 360 aa18.52■□□□□ 0.56
LIME1-204ENST00000476183 MPP4Q96JB8 637 aa18.52■□□□□ 0.56
LIME1-204ENST00000476183 NELFAQ9H3P2 528 aa18.52■□□□□ 0.56
LIME1-204ENST00000476183 ZNF701Q9NV72 531 aaPredicted RBP18.52■□□□□ 0.56
LIME1-204ENST00000476183 CISD1Q9NZ45 108 aaKnown RBP18.52■□□□□ 0.56
LIME1-204ENST00000476183 KPNA4O00629 521 aaPredicted RBP18.51■□□□□ 0.55
LIME1-204ENST00000476183 NME4O00746 187 aa18.51■□□□□ 0.55
LIME1-204ENST00000476183 ARHGEF9O43307 516 aa18.51■□□□□ 0.55
LIME1-204ENST00000476183 SNX3O60493 162 aa18.51■□□□□ 0.55
LIME1-204ENST00000476183 SLC43A1O75387 559 aa18.51■□□□□ 0.55
LIME1-204ENST00000476183 CH25HO95992 272 aa18.51■□□□□ 0.55
LIME1-204ENST00000476183 MT-ATP6P00846 226 aa18.51■□□□□ 0.55
LIME1-204ENST00000476183 SLC7A2P52569 658 aa18.51■□□□□ 0.55
LIME1-204ENST00000476183 POU3F1Q03052 451 aaPredicted RBP18.51■□□□□ 0.55
LIME1-204ENST00000476183 LIPEQ05469 1076 aa18.51■□□□□ 0.55
LIME1-204ENST00000476183 ZNF74Q16587 644 aa18.51■□□□□ 0.55
LIME1-204ENST00000476183 TBRG1Q3YBR2 411 aa18.51■□□□□ 0.55
LIME1-204ENST00000476183 PHYHD1Q5SRE7 291 aa18.51■□□□□ 0.55
LIME1-204ENST00000476183 TTC33Q6PID6 262 aaPredicted RBP18.51■□□□□ 0.55
LIME1-204ENST00000476183 DEF8Q6ZN54 512 aa18.51■□□□□ 0.55
LIME1-204ENST00000476183 PIAS4Q8N2W9 510 aaPredicted RBP18.51■□□□□ 0.55
LIME1-204ENST00000476183 OR5J2Q8NH18 312 aa18.51■□□□□ 0.55
LIME1-204ENST00000476183 ZNF837Q96EG3 531 aaPredicted RBP18.51■□□□□ 0.55
LIME1-204ENST00000476183 EMC6Q9BV81 110 aa18.51■□□□□ 0.55
LIME1-204ENST00000476183 CXorf56Q9H5V9 222 aa18.51■□□□□ 0.55
LIME1-204ENST00000476183 EFCAB1Q9HAE3 211 aa18.51■□□□□ 0.55
LIME1-204ENST00000476183 MED29Q9NX70 200 aa18.51■□□□□ 0.55
LIME1-204ENST00000476183 MAGED1Q9Y5V3 778 aaPredicted RBP18.51■□□□□ 0.55
LIME1-204ENST00000476183 NF1P21359 2839 aa18.5■□□□□ 0.55
LIME1-204ENST00000476183 RPL36A-HNRNPH2H7BZ11 118 aa18.5■□□□□ 0.55
LIME1-204ENST00000476183 IFNA14P01570 189 aa18.5■□□□□ 0.55
LIME1-204ENST00000476183 PRPS1P60891 318 aa18.5■□□□□ 0.55
LIME1-204ENST00000476183 RPS4XP62701 263 aaKnown RBP18.5■□□□□ 0.55
LIME1-204ENST00000476183 PIN1Q13526 163 aaPredicted RBP18.5■□□□□ 0.55
LIME1-204ENST00000476183 HMBOX1Q6NT76 420 aa18.5■□□□□ 0.55
LIME1-204ENST00000476183 HACD2Q6Y1H2 254 aa18.5■□□□□ 0.55
LIME1-204ENST00000476183 B3GLCTQ6Y288 498 aa18.5■□□□□ 0.55
LIME1-204ENST00000476183 YTHDF3Q7Z739 585 aaKnown RBP18.5■□□□□ 0.55
LIME1-204ENST00000476183 NKAIN4Q8IVV8 208 aa18.5■□□□□ 0.55
LIME1-204ENST00000476183 LRRC17Q8N6Y2 441 aa18.5■□□□□ 0.55
LIME1-204ENST00000476183 HOPXQ9BPY8 73 aaPredicted RBP18.5■□□□□ 0.55
LIME1-204ENST00000476183 GPR35Q9HC97 309 aa18.5■□□□□ 0.55
LIME1-204ENST00000476183 MEPEQ9NQ76 525 aaPredicted RBP18.5■□□□□ 0.55
LIME1-204ENST00000476183 MGAT4BQ9UQ53 548 aa18.5■□□□□ 0.55
LIME1-204ENST00000476183 AP3M1Q9Y2T2 418 aa18.5■□□□□ 0.55
LIME1-204ENST00000476183 A0A096LPE4 126 aa18.49■□□□□ 0.55
LIME1-204ENST00000476183 A0A1W2PPZ6 126 aa18.49■□□□□ 0.55
LIME1-204ENST00000476183 E7EQL1 145 aa18.49■□□□□ 0.55
LIME1-204ENST00000476183 OVOL3O00110 214 aa18.49■□□□□ 0.55
LIME1-204ENST00000476183 TMCC2O75069 709 aa18.49■□□□□ 0.55
LIME1-204ENST00000476183 CD8AP01732 235 aa18.49■□□□□ 0.55
LIME1-204ENST00000476183 AHCYP23526 432 aa18.49■□□□□ 0.55
LIME1-204ENST00000476183 NUDT2P50583 147 aa18.49■□□□□ 0.55
LIME1-204ENST00000476183 TAS2R41P59536 307 aa18.49■□□□□ 0.55
LIME1-204ENST00000476183 ARF1P84077 181 aaKnown RBP18.49■□□□□ 0.55
LIME1-204ENST00000476183 CARD17Q5XLA6 110 aa18.49■□□□□ 0.55
LIME1-204ENST00000476183 PRSS57Q6UWY2 283 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms