RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 SNRPCP09234 159 aaKnown RBP3.44□□□□□ -1.86
VPS13D-207ENST00000476169 CCL2P13500 99 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 IDSP22304 550 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 FASP25445 335 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 CHRNB4P30926 498 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 SPRP35270 261 aaPredicted RBP3.44□□□□□ -1.86
VPS13D-207ENST00000476169 SLC26A3P40879 764 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 RIDAP52758 137 aaKnown RBP3.44□□□□□ -1.86
VPS13D-207ENST00000476169 UBE2MP61081 183 aaKnown RBP3.44□□□□□ -1.86
VPS13D-207ENST00000476169 PSMC5P62195 406 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 GRB7Q14451 532 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 SLC10A1Q14973 349 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 HSDL1Q3SXM5 330 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 CARD16Q5EG05 197 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 FAM120AOSQ5T036 256 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 BSPRYQ5W0U4 402 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 ZNF57Q68EA5 555 aaPredicted RBP3.44□□□□□ -1.86
VPS13D-207ENST00000476169 SPECC1LQ69YQ0 1117 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 FAM53AQ6NSI3 398 aaPredicted RBP3.44□□□□□ -1.86
VPS13D-207ENST00000476169 APLFQ8IW19 511 aaPredicted RBP3.44□□□□□ -1.86
VPS13D-207ENST00000476169 IQCKQ8N0W5 287 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 LIX1Q8N485 282 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 MS4A15Q8N5U1 240 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 TRAM1L1Q8N609 369 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 C8orf31Q8N9H6 132 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 LYPD6BQ8NI32 183 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 ZPLD1Q8TCW7 415 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 PYROXD1Q8WU10 500 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 FGF11Q92914 225 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 NAT6Q93015 286 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 NABP1Q96AH0 204 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 APH1AQ96BI3 265 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 WBP1Q96G27 269 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 SEC22AQ96IW7 307 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 CSPG4P5Q96PW8 444 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 TBX15Q96SF7 602 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 NAPGQ99747 312 aaPredicted RBP3.44□□□□□ -1.86
VPS13D-207ENST00000476169 LZTS2Q9BRK4 669 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 ZNF670Q9BS34 389 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 TMEM59Q9BXS4 323 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 KRTAP4-2Q9BYR5 136 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 ACTR3CQ9C0K3 210 aaPredicted RBP3.44□□□□□ -1.86
VPS13D-207ENST00000476169 RACGAP1Q9H0H5 632 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 MRPL47Q9HD33 250 aaKnown RBP3.44□□□□□ -1.86
VPS13D-207ENST00000476169 RETNQ9HD89 108 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 FGF20Q9NP95 211 aaPredicted RBP3.44□□□□□ -1.86
VPS13D-207ENST00000476169 TXLNGQ9NUQ3 528 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 GAB2Q9UQC2 676 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 HECW1Q76N89 1606 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 ABCC5O15440 1437 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 KIAA1107Q9UPP5 1409 aa3.44□□□□□ -1.86
VPS13D-207ENST00000476169 PTPRMP28827 1452 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 MLH3Q9UHC1 1453 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 WDR81Q562E7 1941 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 TRAV6A0A075B6T7 132 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 TRBV9A0A0B4J1U6 114 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 GSTTP1A0A1W2PQM5 241 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 TRPC5OSA6NMA1 111 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 CENPXA8MT69 81 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 NDUFAB1O14561 156 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 TFECO14948 347 aaPredicted RBP3.43□□□□□ -1.86
VPS13D-207ENST00000476169 ETHE1O95571 254 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 CLIC3O95833 236 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 IGHV3-9P01782 118 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 FGGP02679 453 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 HOXD4P09016 255 aaPredicted RBP3.43□□□□□ -1.86
VPS13D-207ENST00000476169 NR2C1P13056 603 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 HPGDP15428 266 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 MGMTP16455 207 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 OXTRP30559 389 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 CALCRP30988 508 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 GPR1P46091 355 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 NPBWR2P48146 333 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 NDUFV3P56181 108 aaKnown RBP3.43□□□□□ -1.86
VPS13D-207ENST00000476169 CLDN18P56856 261 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 FKBP3Q00688 224 aaKnown RBP3.43□□□□□ -1.86
VPS13D-207ENST00000476169 ZNF33AQ06730 810 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 SLC10A7Q0GE19 358 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 KCNJ11Q14654 390 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 PTPN20Q4JDL3 420 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 LINC00242Q5T6M2 205 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 STUMQ69YW2 141 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 Q6ZRP5 223 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 Q6ZSR3 168 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 TRMT10CQ7L0Y3 403 aaKnown RBP3.43□□□□□ -1.86
VPS13D-207ENST00000476169 CARM1Q86X55 608 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 ZNF547Q8IVP9 402 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 NRMQ8IXM6 262 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 CMTM1Q8IZ96 169 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 GATSQ8NAP1 163 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 BEST4Q8NFU0 473 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 OR2G2Q8NGZ5 317 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 ANGPTL6Q8NI99 470 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 TCP10LQ8TDR4 215 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 MRGPRDQ8TDS7 321 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 SETD7Q8WTS6 366 aaKnown RBP3.43□□□□□ -1.86
VPS13D-207ENST00000476169 GTF3AQ92664 365 aaKnown RBP3.43□□□□□ -1.86
VPS13D-207ENST00000476169 C11orf52Q96A22 123 aa3.43□□□□□ -1.86
VPS13D-207ENST00000476169 ZBED3Q96IU2 234 aaPredicted RBP3.43□□□□□ -1.86
VPS13D-207ENST00000476169 C9orf72Q96LT7 481 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms