RNA–Protein interactions for RNA: ENST00000475875.1

CSNK2B-207, Transcript of casein kinase 2 beta, humanhuman

TSL 1 (best)

Gene CSNK2B, Length 590 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2B-207ENST00000475875 KANK2Q63ZY3 851 aa12.34□□□□□ -0.43
CSNK2B-207ENST00000475875 BCL6BQ8N143 479 aaPredicted RBP12.34□□□□□ -0.43
CSNK2B-207ENST00000475875 FAM71CQ8NEG0 241 aa12.34□□□□□ -0.43
CSNK2B-207ENST00000475875 ZNF563Q8TA94 476 aa12.34□□□□□ -0.43
CSNK2B-207ENST00000475875 TAF15Q92804 592 aaKnown RBP eCLIP12.34□□□□□ -0.43
CSNK2B-207ENST00000475875 RAB8BQ92930 207 aa12.34□□□□□ -0.43
CSNK2B-207ENST00000475875 DDIT4LQ96D03 193 aa12.34□□□□□ -0.43
CSNK2B-207ENST00000475875 TIMD4Q96H15 378 aa12.34□□□□□ -0.43
CSNK2B-207ENST00000475875 EGLN2Q96KS0 407 aa12.34□□□□□ -0.43
CSNK2B-207ENST00000475875 SYT3Q9BQG1 590 aa12.34□□□□□ -0.43
CSNK2B-207ENST00000475875 REEP4Q9H6H4 257 aa12.34□□□□□ -0.43
CSNK2B-207ENST00000475875 TNFRSF12AQ9NP84 129 aa12.34□□□□□ -0.43
CSNK2B-207ENST00000475875 NKIRAS2Q9NYR9 191 aa12.34□□□□□ -0.43
CSNK2B-207ENST00000475875 FAF1Q9UNN5 650 aaPredicted RBP12.34□□□□□ -0.43
CSNK2B-207ENST00000475875 WIPI2Q9Y4P8 454 aa12.34□□□□□ -0.43
CSNK2B-207ENST00000475875 NOX1Q9Y5S8 564 aa12.34□□□□□ -0.43
CSNK2B-207ENST00000475875 DNAJC15Q9Y5T4 150 aa12.34□□□□□ -0.43
CSNK2B-207ENST00000475875 DSPPQ9NZW4 1301 aa12.34□□□□□ -0.43
CSNK2B-207ENST00000475875 CLDN25C9JDP6 229 aa12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 RPL36A-HNRNPH2H7BZ11 118 aa12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 POLR3GO15318 223 aaPredicted RBP12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 TRAF3IP2O43734 574 aaPredicted RBP12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 FOXH1O75593 365 aa12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 UBTFL6P0CB48 400 aaPredicted RBP12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 IMPDH2P12268 514 aa12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 ARRB2P32121 409 aa12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 CRYBB2P43320 205 aa12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 NPRL3Q12980 569 aa12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 PDE7AQ13946 482 aa12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 UGT3A2Q3SY77 523 aa12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 ZNF385BQ569K4 471 aa12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 ANKRD26P1Q6NSI1 321 aa12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 TRIM46Q7Z4K8 759 aa12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 OR56A1Q8NGH5 318 aa12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 TWIST2Q8WVJ9 160 aa12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 RAB1CQ92928 201 aa12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 DNAJA3Q96EY1 480 aa12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 SORT1Q99523 831 aa12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 MS4A7Q9GZW8 240 aaPredicted RBP12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 SIRT3Q9NTG7 399 aaPredicted RBP12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 GPR160Q9UJ42 338 aa12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 AUP1Q9Y679 476 aa12.33□□□□□ -0.44
CSNK2B-207ENST00000475875 AQP7P3A6NL99 342 aa12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 TMEM229AB2RXF0 380 aa12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 TMEM233B4DJY2 109 aa12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 SEC22BO75396 215 aa12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 VAMP5O95183 116 aa12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 AK1P00568 194 aa12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 CRYBA1P05813 215 aa12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 BCKDHAP12694 445 aa12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 SELEP16581 610 aa12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 LCN2P80188 198 aa12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 MAD2L1BPQ15013 274 aaPredicted RBP12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 PDCD1Q15116 288 aa12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 FAM205BPQ63HN1 556 aa12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 AP1ARQ63HQ0 302 aa12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 LINGO2Q7L985 606 aa12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 C7orf26Q96N11 449 aa12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 SDF2Q99470 211 aa12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 SH3BP4Q9P0V3 963 aa12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 HAO1Q9UJM8 370 aa12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 PURGQ9UJV8 347 aaKnown RBP12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 SLC35A3Q9Y2D2 325 aa12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 POLR3KQ9Y2Y1 108 aaPredicted RBP12.32□□□□□ -0.44
CSNK2B-207ENST00000475875 IGHV1-69-2A0A0G2JMI3 117 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 A0A1W2PPW3 197 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 C5orf63A6NC05 138 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 TRPC5OSA6NMA1 111 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 HDAC3O15379 428 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 CDC14BO60729 498 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 SKAP2O75563 359 aaPredicted RBP12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 ZNF432O94892 652 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 TSPAN15O95858 294 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 GPIP06744 558 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 VSIG8P0DPA2 414 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 NAT2P11245 290 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 ZNF35P13682 527 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 PGM1P36871 562 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 MAGEB1P43366 347 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 SELENOPP49908 381 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 ROR2Q01974 943 aaKnown RBP12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 KIAA0040Q15053 153 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 FXNQ16595 210 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 TRMT5Q32P41 509 aaKnown RBP12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 MDP1Q86V88 176 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 CMIPQ8IY22 773 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 GLB1L3Q8NCI6 653 aaPredicted RBP12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 ST7LQ8TDW4 575 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 MTERF3Q96E29 417 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 PPP1R36Q96LQ0 422 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 GAL3ST1Q99999 423 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 SLCO1B3Q9NPD5 702 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 EXOSC3Q9NQT5 275 aaKnown RBP12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 GPATCH2Q9NW75 528 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 MARCOQ9UEW3 520 aaPredicted RBP12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 LEF1Q9UJU2 399 aaPredicted RBP12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 KCNE3Q9Y6H6 103 aa12.31□□□□□ -0.44
CSNK2B-207ENST00000475875 TMED7-TICAM2A0A0A6YYA0 188 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 FAM181BA6NEQ2 426 aa12.3□□□□□ -0.44
CSNK2B-207ENST00000475875 C17orf100A8MU93 164 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms