RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 PITHD1Q9GZP4 211 aaPredicted RBP17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 TLNRD1Q9H1K6 362 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 ZFP57Q9NU63 452 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 RNF186Q9NXI6 227 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 ZNF629Q9UEG4 869 aaPredicted RBP17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 RNF222A6NCQ9 220 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 OR14I1A6ND48 311 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 TMEM200CA6NKL6 621 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 CERS1P27544 350 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 NPBWR1P48145 328 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 SLC7A9P82251 487 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 RAB33AQ14088 237 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 AMZ1Q400G9 498 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 C10orf91Q5T1B1 145 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 MRPL2Q5T653 305 aaKnown RBP17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 ARHGAP11AQ6P4F7 1023 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 PGAP1Q75T13 922 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 LINC01555Q8NAE3 123 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 RPS4Y2Q8TD47 263 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 ZNRF4Q8WWF5 429 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 PCBD2Q9H0N5 130 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 C1orf198Q9H425 327 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 TCF7L1Q9HCS4 588 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 PRDM7Q9NQW5 492 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 TINAGQ9UJW2 476 aa17.04■□□□□ 0.32
ECHDC1-214ENST00000474289 SCN5AQ14524 2016 aa17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 SPTBP11277 2137 aa17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 DUXAA6NLW8 204 aa17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 OR6C76A6NM76 312 aa17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 SULT1C2O00338 296 aa17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 SMAD9O15198 467 aaKnown RBP17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 CD3DP04234 171 aa17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 OR4E1P0C645 316 aa17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 AKAIN1P0CW23 69 aa17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 HIST1H1CP16403 213 aaKnown RBP17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 NR0B1P51843 470 aaKnown RBP17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 ST8SIA6P61647 398 aa17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 SRSF3P84103 164 aaKnown RBP17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 DUSP8Q13202 625 aa17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 GGTLC2Q14390 218 aa17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 LRRC37A5PQ49AS3 106 aa17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 TMEM71Q6P5X7 295 aa17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 TMPRSS12Q86WS5 348 aa17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 TCEAL8Q8IYN2 117 aa17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 STEAP2Q8NFT2 490 aa17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 OR7G2Q8NG99 324 aa17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 OR6S1Q8NH40 331 aa17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 DVL3Q92997 716 aaPredicted RBP17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 MS4A6EQ96DS6 147 aa17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 ZNF514Q96K75 400 aaPredicted RBP17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 CARHSP1Q9Y2V2 147 aaKnown RBP17.03■□□□□ 0.32
ECHDC1-214ENST00000474289 TMEM35AQ53FP2 167 aa17.02■□□□□ 0.32
ECHDC1-214ENST00000474289 RAB12Q6IQ22 244 aa17.02■□□□□ 0.32
ECHDC1-214ENST00000474289 OR8S1Q8NH09 359 aa17.02■□□□□ 0.32
ECHDC1-214ENST00000474289 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.02■□□□□ 0.32
ECHDC1-214ENST00000474289 PMS2P2O95744 297 aa17.02■□□□□ 0.32
ECHDC1-214ENST00000474289 SMIM6P0DI80 62 aa17.02■□□□□ 0.32
ECHDC1-214ENST00000474289 EPCAMP16422 314 aa17.02■□□□□ 0.32
ECHDC1-214ENST00000474289 BCL6P41182 706 aa17.02■□□□□ 0.32
ECHDC1-214ENST00000474289 PTGFRP43088 359 aa17.02■□□□□ 0.32
ECHDC1-214ENST00000474289 HAAOP46952 286 aa17.02■□□□□ 0.32
ECHDC1-214ENST00000474289 METAP1P53582 386 aa17.02■□□□□ 0.32
ECHDC1-214ENST00000474289 GAS6Q14393 721 aa17.02■□□□□ 0.32
ECHDC1-214ENST00000474289 ATXN7L3Q14CW9 347 aaPredicted RBP17.02■□□□□ 0.32
ECHDC1-214ENST00000474289 DUSP5Q16690 384 aa17.02■□□□□ 0.32
ECHDC1-214ENST00000474289 C11orf87Q6NUJ2 197 aa17.02■□□□□ 0.32
ECHDC1-214ENST00000474289 ABHD17CQ6PCB6 329 aa17.02■□□□□ 0.32
ECHDC1-214ENST00000474289 MNTQ99583 582 aa17.02■□□□□ 0.32
ECHDC1-214ENST00000474289 ALX4Q9H161 411 aaPredicted RBP17.02■□□□□ 0.32
ECHDC1-214ENST00000474289 SLC23A2Q9UGH3 650 aa17.02■□□□□ 0.32
ECHDC1-214ENST00000474289 GGT3PA6NGU5 568 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 SPINT1O43278 529 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 SNAPINO95295 136 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 ITGB2P05107 769 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 LAMP2P13473 410 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 PDZK1IP1Q13113 114 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 FHL1Q13642 323 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 TEAD2Q15562 447 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 CEBPEQ15744 281 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 OR5M8Q8NGP6 311 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 RNF166Q96A37 237 aaPredicted RBP17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 SDF2Q99470 211 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 ZNF251Q9BRH9 671 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 SLC46A2Q9BY10 475 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 GPR34Q9UPC5 381 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 SNRNP200O75643 2136 aaKnown RBP17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 NPIPA5A0A0B4J1W7 369 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 FAM25EA8MYX2 175 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 PRR32B1ATL7 298 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 NPIPA7E9PJI5 369 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 THBS1P07996 1170 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 ZNF806P0C7X5 589 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 NPIPA8P0DM63 369 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 SLC6A6P31641 620 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 CSF2RBP32927 897 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 DLSTP36957 453 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 SOX2P48431 317 aa17.01■□□□□ 0.31
ECHDC1-214ENST00000474289 TSC22D1Q15714 1073 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms