RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 GNPDA1P46926 289 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 TTPAP49638 278 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 CLCN3P51790 818 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 RAG2P55895 527 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 DNAJB13P59910 316 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 KCNJ11Q14654 390 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 PSG5Q15238 335 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 SF3A2Q15428 464 aaKnown RBP5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 RPE65Q16518 533 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 PTGISQ16647 500 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 SMIM21Q3B7S5 101 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 UBE2UQ5VVX9 321 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 BICRALQ6AI39 1079 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 SLC27A4Q6P1M0 643 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 FAM131AQ6UXB0 335 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 TFAP2EQ6VUC0 442 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 CYS1Q717R9 158 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 CPEB2Q7Z5Q1 589 aaKnown RBP5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 MRPL52Q86TS9 123 aaKnown RBP5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 RANBP3LQ86VV4 465 aaPredicted RBP5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 PTOV1Q86YD1 416 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 CBWD2Q8IUF1 395 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 ERI1Q8IV48 349 aaKnown RBP5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 RDH10Q8IZV5 341 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 ZNF283Q8N7M2 679 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 SLC38A9Q8NBW4 561 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 OR10X1Q8NGY0 326 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 SLC35B2Q8TB61 432 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 AENQ8WTP8 325 aaKnown RBP5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 SFT2D1Q8WV19 159 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 RPL3LQ92901 407 aaKnown RBP5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 EXTL1Q92935 676 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 ZG16BQ96DA0 208 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 CAPZA3Q96KX2 299 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 VPS25Q9BRG1 176 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 PPIL3Q9H2H8 161 aaKnown RBP5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 ANKRD19PQ9H560 264 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 SEBOXQ9HB31 216 aaPredicted RBP5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 PRR13Q9NZ81 148 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 NKX1-2Q9UD57 310 aaPredicted RBP5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 KIF25Q9UIL4 384 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 ZNF391Q9UJN7 358 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 FARSAQ9Y285 508 aaKnown RBP5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 ATG4BQ9Y4P1 393 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 NME7Q9Y5B8 376 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 HS3ST3A1Q9Y663 406 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 STYXL1Q9Y6J8 313 aa5.53□□□□□ -1.52
SMARCE1-208ENST00000474246 A0A1B0GUL6 1792 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 LOC105371242A0A075B767 164 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 CCDC160A6NGH7 325 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 MBD3L5A6NJ08 208 aaPredicted RBP5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 AZIN1O14977 448 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 ZBTB5O15062 677 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 UBDO15205 165 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 SIGLEC6O43699 453 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 UGT2B11O75310 529 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 KHDRBS3O75525 346 aaKnown RBP5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 CEACAM4O75871 244 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 GJB5O95377 273 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 TSPAN13O95857 204 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 GH2P01242 217 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 OR8U9P0C7N5 309 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 BMP7P18075 431 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 HTR2CP28335 458 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 GKP32189 559 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 MAP2K4P45985 399 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 LHX1P48742 406 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 ARL4DP49703 201 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 CHN2P52757 468 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 CTSWP56202 376 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 FGFBP1Q14512 234 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 CYP51A1Q16850 503 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 TPRG1LQ5T0D9 272 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 FAM69BQ5VUD6 431 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 LRRC8EQ6NSJ5 796 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 ZNF774Q6NX45 483 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 LINGO2Q7L985 606 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 DEFB128Q7Z7B8 93 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 RAB43Q86YS6 212 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 ARRDC1Q8N5I2 433 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 BEND7Q8N7W2 519 aaPredicted RBP5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 OR6K3Q8NGY3 331 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 SPATA22Q8NHS9 363 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 LNX1Q8TBB1 728 aaPredicted RBP5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 C1orf54Q8WWF1 131 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 OVCA2Q8WZ82 227 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 PINX1Q96BK5 328 aaKnown RBP5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 MOAP1Q96BY2 351 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 ORAI1Q96D31 301 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 MYADMQ96S97 322 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 SDHCQ99643 169 aaPredicted RBP5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 H2AFJQ9BTM1 129 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 BARHL1Q9BZE3 327 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 PRDM14Q9GZV8 571 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 NEUROG2Q9H2A3 272 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 ZNF556Q9HAH1 456 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 ZNF334Q9HCZ1 680 aaPredicted RBP5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 EQTNQ9NQ60 294 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 MED23Q9ULK4 1368 aa5.52□□□□□ -1.53
SMARCE1-208ENST00000474246 KBTBD11-OT1A0A1B0GTJ5 212 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms