RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 MT-ATP6P00846 226 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 IFNA14P01570 189 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 CD8AP01732 235 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 THY1P04216 161 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 INHBBP09529 407 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 CDH11P55287 796 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 ATP5J2P56134 94 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 SLC25A3Q00325 362 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 IL1RL1Q01638 556 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 ROR2Q01974 943 aaKnown RBP9.79□□□□□ -0.84
CKS1B-206ENST00000474215 HMBOX1Q6NT76 420 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 ANKRD16Q6P6B7 361 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 KLHL24Q6TFL4 600 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 NHLRC1Q6VVB1 395 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 LINGO2Q7L985 606 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 BIVMQ86UB2 503 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 UEVLDQ8IX04 471 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 PIK3C3Q8NEB9 887 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 OR1K1Q8NGR3 316 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 RP9Q8TA86 221 aaKnown RBP9.79□□□□□ -0.84
CKS1B-206ENST00000474215 ADAMTS16Q8TE57 1224 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 PROX1Q92786 737 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 GTPBP3Q969Y2 492 aaKnown RBP9.79□□□□□ -0.84
CKS1B-206ENST00000474215 TRMT61AQ96FX7 289 aaKnown RBP9.79□□□□□ -0.84
CKS1B-206ENST00000474215 ALKBH3Q96Q83 286 aaPredicted RBP9.79□□□□□ -0.84
CKS1B-206ENST00000474215 OR2M2Q96R28 347 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 BDH2Q9BUT1 245 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 GRIP2Q9C0E4 1043 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 GSX1Q9H4S2 264 aaPredicted RBP9.79□□□□□ -0.84
CKS1B-206ENST00000474215 OBP2BQ9NPH6 170 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 FAIMQ9NVQ4 179 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 MRPL39Q9NYK5 338 aaKnown RBP9.79□□□□□ -0.84
CKS1B-206ENST00000474215 METRNQ9UJH8 293 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 POU2F3Q9UKI9 436 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 BAG5Q9UL15 447 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 SLC7A7Q9UM01 511 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 USP22Q9UPT9 525 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 SH3GLB1Q9Y371 365 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 NOX1Q9Y5S8 564 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 ROS1P08922 2347 aa9.79□□□□□ -0.84
CKS1B-206ENST00000474215 E7EQL1 145 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 LRRN3E7EW58 273 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 PLPP3O14495 311 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 TRAF3IP2O43734 574 aaPredicted RBP9.78□□□□□ -0.84
CKS1B-206ENST00000474215 AKAP8O43823 692 aaKnown RBP9.78□□□□□ -0.84
CKS1B-206ENST00000474215 COX4I1P13073 169 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 HLA-DOBP13765 273 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 HOXB1P14653 301 aaPredicted RBP9.78□□□□□ -0.84
CKS1B-206ENST00000474215 PTNP21246 168 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 PAX7P23759 505 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 SH3BGRP55822 239 aaPredicted RBP9.78□□□□□ -0.84
CKS1B-206ENST00000474215 ARF1P84077 181 aaKnown RBP9.78□□□□□ -0.84
CKS1B-206ENST00000474215 SPOCK1Q08629 439 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 TBRG1Q3YBR2 411 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 AGAP6Q5VW22 663 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 TTC33Q6PID6 262 aaPredicted RBP9.78□□□□□ -0.84
CKS1B-206ENST00000474215 WDR88Q6ZMY6 472 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 PXKQ7Z7A4 578 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 DTX2Q86UW9 622 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 TSPYL5Q86VY4 417 aaPredicted RBP9.78□□□□□ -0.84
CKS1B-206ENST00000474215 TMEM123Q8N131 208 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 GPR137CQ8N3F9 429 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 POU5F2Q8N7G0 328 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 OR2T12Q8NG77 320 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 MAGEE2Q8TD90 523 aaPredicted RBP9.78□□□□□ -0.84
CKS1B-206ENST00000474215 RCN3Q96D15 328 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 MPP4Q96JB8 637 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 DHRS9Q9BPW9 319 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 TRAF4Q9BUZ4 470 aaPredicted RBP9.78□□□□□ -0.84
CKS1B-206ENST00000474215 SLC19A3Q9BZV2 496 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 ALG2Q9H553 416 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 FKRPQ9H9S5 495 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 GPR35Q9HC97 309 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 AP3M1Q9Y2T2 418 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 ACANP16112 2415 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 DSCAMO60469 2012 aa9.78□□□□□ -0.84
CKS1B-206ENST00000474215 A0A096LPE4 126 aa9.77□□□□□ -0.85
CKS1B-206ENST00000474215 ARPC4-TTLL3A0A0A6YYG9 625 aa9.77□□□□□ -0.85
CKS1B-206ENST00000474215 A0A1W2PPZ6 126 aa9.77□□□□□ -0.85
CKS1B-206ENST00000474215 SLC35F4A4IF30 521 aa9.77□□□□□ -0.85
CKS1B-206ENST00000474215 FAM220BPB1ANY3 271 aa9.77□□□□□ -0.85
CKS1B-206ENST00000474215 H7C1Q1 480 aa9.77□□□□□ -0.85
CKS1B-206ENST00000474215 OR6A2O95222 327 aa9.77□□□□□ -0.85
CKS1B-206ENST00000474215 CH25HO95992 272 aa9.77□□□□□ -0.85
CKS1B-206ENST00000474215 AHCYP23526 432 aa9.77□□□□□ -0.85
CKS1B-206ENST00000474215 KDELR2P33947 212 aa9.77□□□□□ -0.85
CKS1B-206ENST00000474215 TTKP33981 857 aa9.77□□□□□ -0.85
CKS1B-206ENST00000474215 CDKN1AP38936 164 aa9.77□□□□□ -0.85
CKS1B-206ENST00000474215 UBE2NP61088 152 aaKnown RBP9.77□□□□□ -0.85
CKS1B-206ENST00000474215 POU3F1Q03052 451 aaPredicted RBP9.77□□□□□ -0.85
CKS1B-206ENST00000474215 PUDPQ08623 228 aa9.77□□□□□ -0.85
CKS1B-206ENST00000474215 ZNF74Q16587 644 aa9.77□□□□□ -0.85
CKS1B-206ENST00000474215 CYBRD1Q53TN4 286 aa9.77□□□□□ -0.85
CKS1B-206ENST00000474215 CARM1Q86X55 608 aa9.77□□□□□ -0.85
CKS1B-206ENST00000474215 C20orf196Q8IYI0 205 aa9.77□□□□□ -0.85
CKS1B-206ENST00000474215 MICU2Q8IYU8 434 aa9.77□□□□□ -0.85
CKS1B-206ENST00000474215 CIARTQ8N365 385 aaPredicted RBP9.77□□□□□ -0.85
CKS1B-206ENST00000474215 OR5J2Q8NH18 312 aa9.77□□□□□ -0.85
CKS1B-206ENST00000474215 TXNDC15Q96J42 360 aa9.77□□□□□ -0.85
CKS1B-206ENST00000474215 COX4I2Q96KJ9 171 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms