RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 ACVR1BP36896 505 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 SSR1P43307 286 aaKnown RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 SLC8A3P57103 927 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 RGS8P57771 180 aaPredicted RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 UBE2KP61086 200 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 ABCE1P61221 599 aaKnown RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 OSTNP61366 133 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 IL18R1Q13478 541 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 EIF2B1Q14232 305 aaKnown RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 SRSF7Q16629 238 aaKnown RBP eCLIP2.19□□□□□ -2.06
XRN1-210ENST00000472697 KIF26BQ2KJY2 2108 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 RFTN2Q52LD8 501 aaPredicted RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 SPECC1LQ69YQ0 1117 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 PVRIGQ6DKI7 326 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 C1orf94Q6P1W5 598 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 C12orf54Q6X4T0 127 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 TUBA1AQ71U36 451 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 APTXQ7Z2E3 356 aaKnown RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 LINC00523Q86TU6 105 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 TGIF2LXQ8IUE1 241 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 PUSL1Q8N0Z8 303 aaKnown RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 FAM89BQ8N5H3 189 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 CLDN19Q8N6F1 224 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 ZNF781Q8N8C0 355 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 ZNF248Q8NDW4 579 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 FBXO36Q8NEA4 188 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 FBXO25Q8TCJ0 367 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 DTX3LQ8TDB6 740 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 PCNPQ8WW12 178 aaKnown RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 SCRN2Q96FV2 425 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 ZNF641Q96N77 438 aaPredicted RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 TUBA1CQ9BQE3 449 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 FAM49AQ9H0Q0 323 aaPredicted RBP2.19□□□□□ -2.06
XRN1-210ENST00000472697 RBKSQ9H477 322 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 EBF2Q9HAK2 575 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 CLEC2DQ9UHP7 191 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 RIMS3Q9UJD0 308 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 CSNK1G3Q9Y6M4 447 aa2.19□□□□□ -2.06
XRN1-210ENST00000472697 NUP98P52948 1817 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 COL4A1P02462 1669 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 CEMIPQ8WUJ3 1361 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 A0A087X002 238 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 ZNF705EA8MWA4 302 aaPredicted RBP2.18□□□□□ -2.06
XRN1-210ENST00000472697 SCRG1O75711 98 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 LYPD3O95274 346 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 SLPIP03973 132 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 KRT16P08779 473 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 ZNF23P17027 643 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 STOMP27105 288 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 FGF9P31371 208 aaPredicted RBP2.18□□□□□ -2.06
XRN1-210ENST00000472697 GPR183P32249 361 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 HCAR3P49019 387 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 GSK3BP49841 420 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 PSMD4P55036 377 aaKnown RBP2.18□□□□□ -2.06
XRN1-210ENST00000472697 ACTA2P62736 377 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 ACTG2P63267 376 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 ACTC1P68032 377 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 ACTA1P68133 377 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 DHODHQ02127 395 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 OGDHQ02218 1023 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 ITGB3BPQ13352 177 aaPredicted RBP2.18□□□□□ -2.06
XRN1-210ENST00000472697 MLF2Q15773 248 aaPredicted RBP2.18□□□□□ -2.06
XRN1-210ENST00000472697 NDUFAF6Q330K2 333 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 SCYL2Q6P3W7 929 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 SLC26A9Q7LBE3 791 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 SLC16A14Q7RTX9 510 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 RALGPS2Q86X27 583 aaPredicted RBP2.18□□□□□ -2.06
XRN1-210ENST00000472697 CCDC65Q8IXS2 484 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 MREGQ8N565 214 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 OR56B4Q8NH76 319 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 U2AF1L4Q8WU68 220 aaKnown RBP2.18□□□□□ -2.06
XRN1-210ENST00000472697 SGK3Q96BR1 496 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 ZNF524Q96C55 264 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 ECHDC3Q96DC8 303 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 LURAP1Q96LR2 239 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 ZNF778Q96MU6 729 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 CDX2Q99626 313 aaPredicted RBP2.18□□□□□ -2.06
XRN1-210ENST00000472697 ZNF670Q9BS34 389 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 UCK2Q9BZX2 261 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 IQCGQ9H095 443 aaKnown RBP2.18□□□□□ -2.06
XRN1-210ENST00000472697 CWH43Q9H720 699 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 TDRD3Q9H7E2 651 aaKnown RBP2.18□□□□□ -2.06
XRN1-210ENST00000472697 VIPAS39Q9H9C1 493 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 C20orf96Q9NUD7 363 aaPredicted RBP2.18□□□□□ -2.06
XRN1-210ENST00000472697 ERVW-1Q9UQF0 538 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 TRAF3IP3Q9Y228 551 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 OTOFQ9HC10 1997 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 GRIN2DO15399 1336 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 SMCO3A2RU48 225 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 K7EQG2 157 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 SAP18O00422 153 aaKnown RBP2.18□□□□□ -2.06
XRN1-210ENST00000472697 NR5A2O00482 541 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 CCSO14618 274 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 CABYRO75952 493 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 NXPH4O95158 308 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 CLIC3O95833 236 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 NDUFB10O96000 172 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 FOLR1P15328 257 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 PRKACAP17612 351 aa2.18□□□□□ -2.06
XRN1-210ENST00000472697 CEACAM3P40198 252 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms