RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 GABRA6Q16445 453 aa13.24□□□□□ -0.29
CALD1-215ENST00000472096 DEFB113Q30KQ7 82 aa13.24□□□□□ -0.29
CALD1-215ENST00000472096 NCMAPQ5T1S8 102 aa13.24□□□□□ -0.29
CALD1-215ENST00000472096 C9orf135Q5VTT2 229 aa13.24□□□□□ -0.29
CALD1-215ENST00000472096 OR7E24Q6IFN5 339 aa13.24□□□□□ -0.29
CALD1-215ENST00000472096 NIPAL3Q6P499 406 aa13.24□□□□□ -0.29
CALD1-215ENST00000472096 DEF8Q6ZN54 512 aa13.24□□□□□ -0.29
CALD1-215ENST00000472096 C20orf204Q6ZNR8 217 aa13.24□□□□□ -0.29
CALD1-215ENST00000472096 H1FNTQ75WM6 255 aaPredicted RBP13.24□□□□□ -0.29
CALD1-215ENST00000472096 SSX8Q7RTT4 187 aa13.24□□□□□ -0.29
CALD1-215ENST00000472096 C1orf162Q8NEQ5 155 aaPredicted RBP13.24□□□□□ -0.29
CALD1-215ENST00000472096 MUCL1Q96DR8 90 aa13.24□□□□□ -0.29
CALD1-215ENST00000472096 MPP4Q96JB8 637 aa13.24□□□□□ -0.29
CALD1-215ENST00000472096 ALKBH3Q96Q83 286 aaPredicted RBP13.24□□□□□ -0.29
CALD1-215ENST00000472096 ZNF426Q9BUY5 554 aa13.24□□□□□ -0.29
CALD1-215ENST00000472096 NPAP1Q9NZP6 1156 aa13.24□□□□□ -0.29
CALD1-215ENST00000472096 PLCE1Q9P212 2302 aa13.24□□□□□ -0.29
CALD1-215ENST00000472096 ARID1AO14497 2285 aa13.24□□□□□ -0.29
CALD1-215ENST00000472096 CXCR6O00574 342 aa13.23□□□□□ -0.29
CALD1-215ENST00000472096 SHOX2O60902 331 aaPredicted RBP13.23□□□□□ -0.29
CALD1-215ENST00000472096 HPRP00739 348 aa13.23□□□□□ -0.29
CALD1-215ENST00000472096 MT-ATP6P00846 226 aa13.23□□□□□ -0.29
CALD1-215ENST00000472096 NQO1P15559 274 aaKnown RBP13.23□□□□□ -0.29
CALD1-215ENST00000472096 OR1E2P47887 323 aa13.23□□□□□ -0.29
CALD1-215ENST00000472096 TAS2R41P59536 307 aa13.23□□□□□ -0.29
CALD1-215ENST00000472096 PSME3P61289 254 aa13.23□□□□□ -0.29
CALD1-215ENST00000472096 IL1RL1Q01638 556 aa13.23□□□□□ -0.29
CALD1-215ENST00000472096 BSPH1Q075Z2 132 aa13.23□□□□□ -0.29
CALD1-215ENST00000472096 ACKR1Q16570 336 aa13.23□□□□□ -0.29
CALD1-215ENST00000472096 TTC33Q6PID6 262 aaPredicted RBP13.23□□□□□ -0.29
CALD1-215ENST00000472096 ABHD12BQ7Z5M8 362 aaPredicted RBP13.23□□□□□ -0.29
CALD1-215ENST00000472096 PIGWQ7Z7B1 504 aa13.23□□□□□ -0.29
CALD1-215ENST00000472096 UEVLDQ8IX04 471 aa13.23□□□□□ -0.29
CALD1-215ENST00000472096 C17orf78Q8N4C9 275 aa13.23□□□□□ -0.29
CALD1-215ENST00000472096 C10orf53Q8N6V4 93 aa13.23□□□□□ -0.29
CALD1-215ENST00000472096 OR52N5Q8NH56 324 aa13.23□□□□□ -0.29
CALD1-215ENST00000472096 TPD52L3Q96J77 140 aa13.23□□□□□ -0.29
CALD1-215ENST00000472096 MUS81Q96NY9 551 aa13.23□□□□□ -0.29
CALD1-215ENST00000472096 PRSS27Q9BQR3 290 aa13.23□□□□□ -0.29
CALD1-215ENST00000472096 POLR2J2Q9GZM3 115 aaKnown RBP13.23□□□□□ -0.29
CALD1-215ENST00000472096 POLR2J3Q9H1A7 115 aaKnown RBP13.23□□□□□ -0.29
CALD1-215ENST00000472096 ESRP2Q9H6T0 727 aaKnown RBP13.23□□□□□ -0.29
CALD1-215ENST00000472096 MRPL39Q9NYK5 338 aaKnown RBP13.23□□□□□ -0.29
CALD1-215ENST00000472096 ARL2BPQ9Y2Y0 163 aa13.23□□□□□ -0.29
CALD1-215ENST00000472096 RNF115Q9Y4L5 304 aa13.23□□□□□ -0.29
CALD1-215ENST00000472096 SLC25A15Q9Y619 301 aa13.23□□□□□ -0.29
CALD1-215ENST00000472096 LOC102725191A0A1B0GVB3 256 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 A0A1W2PR80 420 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 OR6C65A6NJZ3 312 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 ZNF587BE7ETH6 402 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 MS4A18H0YCH9 400 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 KPNA4O00629 521 aaPredicted RBP13.22□□□□□ -0.29
CALD1-215ENST00000472096 NDUFAB1O14561 156 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 AKAP8O43823 692 aaKnown RBP13.22□□□□□ -0.29
CALD1-215ENST00000472096 UPK3AO75631 287 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 ZNF432O94892 652 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 OR5F1O95221 314 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 CD3EP07766 207 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 SELENOWP63302 87 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 TGFBR3Q03167 851 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 PUDPQ08623 228 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 PMS2P3Q13401 168 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 C1DQ13901 141 aaKnown RBP13.22□□□□□ -0.29
CALD1-215ENST00000472096 ZNF74Q16587 644 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 MS4A18Q3C1V0 323 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 LINGO2Q7L985 606 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 LZICQ8WZA0 190 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 CCL19Q99731 98 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 KCTD14Q9BQ13 255 aaPredicted RBP13.22□□□□□ -0.29
CALD1-215ENST00000472096 LINC00470Q9BZP3 86 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 SLC19A3Q9BZV2 496 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 SPAG4Q9NPE6 437 aa13.22□□□□□ -0.29
CALD1-215ENST00000472096 BEX4Q9NWD9 120 aaPredicted RBP13.22□□□□□ -0.29
CALD1-215ENST00000472096 HIVEP1P15822 2718 aa13.21□□□□□ -0.29
CALD1-215ENST00000472096 DPRXA6NFQ7 191 aa13.21□□□□□ -0.29
CALD1-215ENST00000472096 HS3ST1O14792 307 aa13.21□□□□□ -0.29
CALD1-215ENST00000472096 GSTA4O15217 222 aa13.21□□□□□ -0.29
CALD1-215ENST00000472096 CLOCKO15516 846 aa13.21□□□□□ -0.29
CALD1-215ENST00000472096 KRT33AO76009 404 aa13.21□□□□□ -0.29
CALD1-215ENST00000472096 CH25HO95992 272 aa13.21□□□□□ -0.29
CALD1-215ENST00000472096 HLA-DOBP13765 273 aa13.21□□□□□ -0.29
CALD1-215ENST00000472096 SNRPBP14678 240 aaKnown RBP13.21□□□□□ -0.29
CALD1-215ENST00000472096 SLC25A3Q00325 362 aa13.21□□□□□ -0.29
CALD1-215ENST00000472096 POU3F1Q03052 451 aaPredicted RBP13.21□□□□□ -0.29
CALD1-215ENST00000472096 VTCN1Q7Z7D3 282 aa13.21□□□□□ -0.29
CALD1-215ENST00000472096 NKAIN4Q8IVV8 208 aa13.21□□□□□ -0.29
CALD1-215ENST00000472096 ALDH16A1Q8IZ83 802 aa13.21□□□□□ -0.29
CALD1-215ENST00000472096 TMEM123Q8N131 208 aa13.21□□□□□ -0.29
CALD1-215ENST00000472096 WDR31Q8NA23 367 aa13.21□□□□□ -0.29
CALD1-215ENST00000472096 KBTBD8Q8NFY9 601 aa13.21□□□□□ -0.29
CALD1-215ENST00000472096 OR5J2Q8NH18 312 aa13.21□□□□□ -0.29
CALD1-215ENST00000472096 AKAP1Q92667 903 aaKnown RBP eCLIP13.21□□□□□ -0.29
CALD1-215ENST00000472096 PRRC1Q96M27 445 aa13.21□□□□□ -0.29
CALD1-215ENST00000472096 OR2M2Q96R28 347 aa13.21□□□□□ -0.29
CALD1-215ENST00000472096 FKRPQ9H9S5 495 aa13.21□□□□□ -0.29
CALD1-215ENST00000472096 MEPEQ9NQ76 525 aaPredicted RBP13.21□□□□□ -0.29
CALD1-215ENST00000472096 SLC17A5Q9NRA2 495 aa13.21□□□□□ -0.29
CALD1-215ENST00000472096 AMDHD2Q9Y303 409 aa13.21□□□□□ -0.29
CALD1-215ENST00000472096 ITPR3Q14573 2671 aa13.21□□□□□ -0.3
CALD1-215ENST00000472096 PLPP3O14495 311 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms