RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 GMEB1Q9Y692 573 aa11.91□□□□□ -0.5
HMGN1-211ENST00000471260 A0A087WXM4 84 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 CIB4A0PJX0 185 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 CLOCKO15516 846 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 DANCRP0C864 163 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 IMPDH2P12268 514 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 CCNA2P20248 432 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 PPIBP23284 216 aaKnown RBP11.9□□□□□ -0.5
HMGN1-211ENST00000471260 EDNRAP25101 427 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 IDUAP35475 653 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 RPS4XP62701 263 aaKnown RBP11.9□□□□□ -0.5
HMGN1-211ENST00000471260 BSPH1Q075Z2 132 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 SLC17A1Q14916 467 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 STK11Q15831 433 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 ETFDHQ16134 617 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 GTDC1Q4AE62 458 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 LRIF1Q5T3J3 769 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 CCDC103Q8IW40 242 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 ADGRG5Q8IZF4 528 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 GALNT4Q8N4A0 578 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 OR8J3Q8NGG0 315 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 OR52E4Q8NGH9 312 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 ADAMTS16Q8TE57 1224 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 SMAP2Q8WU79 429 aaPredicted RBP11.9□□□□□ -0.5
HMGN1-211ENST00000471260 TFAP2CQ92754 450 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 TRMT61AQ96FX7 289 aaKnown RBP11.9□□□□□ -0.5
HMGN1-211ENST00000471260 AURKBQ96GD4 344 aaPredicted RBP11.9□□□□□ -0.5
HMGN1-211ENST00000471260 MUS81Q96NY9 551 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 KCTD14Q9BQ13 255 aaPredicted RBP11.9□□□□□ -0.5
HMGN1-211ENST00000471260 GRIP2Q9C0E4 1043 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 CMTM6Q9NX76 183 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 MGAT4BQ9UQ53 548 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 LAMP3Q9UQV4 416 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 FLVCR1Q9Y5Y0 555 aa11.9□□□□□ -0.5
HMGN1-211ENST00000471260 TCRBV5S2A0A599 114 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 DPRXA6NFQ7 191 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 LIPT2A6NK58 231 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 A8MVM7 634 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 OVOL3O00110 214 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 VAMP5O95183 116 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 HPRP00739 348 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 GKN3PP0CG01 181 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 ETS2P15036 469 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 HOXB9P17482 250 aaPredicted RBP11.89□□□□□ -0.51
HMGN1-211ENST00000471260 HOXB4P17483 251 aaPredicted RBP11.89□□□□□ -0.51
HMGN1-211ENST00000471260 PTAFRP25105 342 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 NTF4P34130 210 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 MSX2P35548 267 aaPredicted RBP11.89□□□□□ -0.51
HMGN1-211ENST00000471260 GSK3BP49841 420 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 TGFBR3Q03167 851 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 ZNF311Q5JNZ3 666 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 OTUD3Q5T2D3 398 aaPredicted RBP11.89□□□□□ -0.51
HMGN1-211ENST00000471260 SLC2A7Q6PXP3 512 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 TMEM108Q6UXF1 575 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 CLEC9AQ6UXN8 241 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 CYP2R1Q6VVX0 501 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 C17orf78Q8N4C9 275 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 C1orf162Q8NEQ5 155 aaPredicted RBP11.89□□□□□ -0.51
HMGN1-211ENST00000471260 BBS10Q8TAM1 723 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 STK35Q8TDR2 534 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 CANT1Q8WVQ1 401 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 TMEM45BQ96B21 275 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 TAPBPLQ9BX59 468 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 TRIM2Q9C040 744 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 FAIMQ9NVQ4 179 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 UPB1Q9UBR1 384 aa11.89□□□□□ -0.51
HMGN1-211ENST00000471260 CADP27708 2225 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 USF3Q68DE3 2245 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 ZC3H12DA2A288 527 aaKnown RBP11.88□□□□□ -0.51
HMGN1-211ENST00000471260 AQP7P3A6NL99 342 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 H0YAE9 185 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 RAMP1O60894 148 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 TIPRLO75663 272 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 RAD51DO75771 328 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 IGHV3-9P01782 118 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 HEXAP06865 529 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 ATP5J2P56134 94 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 ESRRGP62508 458 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 LTBQ06643 244 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 FAPQ12884 760 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 KLHL17Q6TDP4 642 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 CASP12Q6UXS9 341 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.88□□□□□ -0.51
HMGN1-211ENST00000471260 ABHD12BQ7Z5M8 362 aaPredicted RBP11.88□□□□□ -0.51
HMGN1-211ENST00000471260 EPHX4Q8IUS5 362 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 CLIP4Q8N3C7 705 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 CADM2Q8N3J6 435 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 POMGNT2Q8NAT1 580 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 LZICQ8WZA0 190 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 GTPBP3Q969Y2 492 aaKnown RBP11.88□□□□□ -0.51
HMGN1-211ENST00000471260 DNAJA3Q96EY1 480 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 BOD1Q96IK1 185 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 CIB1Q99828 191 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 SH3GL1Q99961 368 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 ADI1Q9BV57 179 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 SPATA5L1Q9BVQ7 753 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 AMBRA1Q9C0C7 1298 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 C12orf10Q9HB07 376 aa11.88□□□□□ -0.51
HMGN1-211ENST00000471260 CISD1Q9NZ45 108 aaKnown RBP11.88□□□□□ -0.51
HMGN1-211ENST00000471260 CORO2BQ9UQ03 480 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms