RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 Q96MF0 132 aa12.31□□□□□ -0.44
COMMD3-208ENST00000470045 ZNF583Q96ND8 569 aa12.31□□□□□ -0.44
COMMD3-208ENST00000470045 MOGAT1Q96PD6 335 aa12.31□□□□□ -0.44
COMMD3-208ENST00000470045 ZNF426Q9BUY5 554 aa12.31□□□□□ -0.44
COMMD3-208ENST00000470045 TRAF4Q9BUZ4 470 aaPredicted RBP12.31□□□□□ -0.44
COMMD3-208ENST00000470045 NELFAQ9H3P2 528 aa12.31□□□□□ -0.44
COMMD3-208ENST00000470045 MRPL39Q9NYK5 338 aaKnown RBP12.31□□□□□ -0.44
COMMD3-208ENST00000470045 CISD1Q9NZ45 108 aaKnown RBP12.31□□□□□ -0.44
COMMD3-208ENST00000470045 CAPN7Q9Y6W3 813 aa12.31□□□□□ -0.44
COMMD3-208ENST00000470045 ARPC4-TTLL3A0A0A6YYG9 625 aa12.3□□□□□ -0.44
COMMD3-208ENST00000470045 CPSF4LA6NMK7 179 aaKnown RBP12.3□□□□□ -0.44
COMMD3-208ENST00000470045 MS4A18H0YCH9 400 aa12.3□□□□□ -0.44
COMMD3-208ENST00000470045 M0R1B8 84 aa12.3□□□□□ -0.44
COMMD3-208ENST00000470045 ATP8B1O43520 1251 aa12.3□□□□□ -0.44
COMMD3-208ENST00000470045 HPRP00739 348 aa12.3□□□□□ -0.44
COMMD3-208ENST00000470045 MT-ATP6P00846 226 aa12.3□□□□□ -0.44
COMMD3-208ENST00000470045 CD8AP01732 235 aa12.3□□□□□ -0.44
COMMD3-208ENST00000470045 INHBBP09529 407 aa12.3□□□□□ -0.44
COMMD3-208ENST00000470045 SH3BGRP55822 239 aaPredicted RBP12.3□□□□□ -0.44
COMMD3-208ENST00000470045 PRPS1P60891 318 aa12.3□□□□□ -0.44
COMMD3-208ENST00000470045 MS4A18Q3C1V0 323 aa12.3□□□□□ -0.44
COMMD3-208ENST00000470045 TBRG1Q3YBR2 411 aa12.3□□□□□ -0.44
COMMD3-208ENST00000470045 HIKESHIQ53FT3 197 aa12.3□□□□□ -0.44
COMMD3-208ENST00000470045 ERICH5Q6P6B1 374 aa12.3□□□□□ -0.44
COMMD3-208ENST00000470045 B3GLCTQ6Y288 498 aa12.3□□□□□ -0.44
COMMD3-208ENST00000470045 RBM45Q8IUH3 476 aaKnown RBP12.3□□□□□ -0.44
COMMD3-208ENST00000470045 TMEM123Q8N131 208 aa12.3□□□□□ -0.44
COMMD3-208ENST00000470045 PCYOX1LQ8NBM8 494 aa12.3□□□□□ -0.44
COMMD3-208ENST00000470045 MAGEE2Q8TD90 523 aaPredicted RBP12.3□□□□□ -0.44
COMMD3-208ENST00000470045 BCL2L2Q92843 193 aaPredicted RBP12.3□□□□□ -0.44
COMMD3-208ENST00000470045 OR2M2Q96R28 347 aa12.3□□□□□ -0.44
COMMD3-208ENST00000470045 ECSITQ9BQ95 431 aa12.3□□□□□ -0.44
COMMD3-208ENST00000470045 GSX1Q9H4S2 264 aaPredicted RBP12.3□□□□□ -0.44
COMMD3-208ENST00000470045 USP22Q9UPT9 525 aa12.3□□□□□ -0.44
COMMD3-208ENST00000470045 LOC100653049A0A140TA62 436 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 TRAPPC13A5PLN9 417 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 FAM220BPB1ANY3 271 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 E7EQL1 145 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 LRRN3E7EW58 273 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 AKAP8O43823 692 aaKnown RBP12.29□□□□□ -0.44
COMMD3-208ENST00000470045 SLC43A1O75387 559 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 KRT33AO76009 404 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 KRT34O76011 436 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 WNT11O96014 354 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 PTNP21246 168 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 CBLP22681 906 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 PAX7P23759 505 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 ATP5J2P56134 94 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 ROR2Q01974 943 aaKnown RBP12.29□□□□□ -0.44
COMMD3-208ENST00000470045 C1DQ13901 141 aaKnown RBP12.29□□□□□ -0.44
COMMD3-208ENST00000470045 C11orf71Q6IPW1 123 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 SLC22A25Q6T423 547 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 KLHL24Q6TFL4 600 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 CIARTQ8N365 385 aaPredicted RBP12.29□□□□□ -0.44
COMMD3-208ENST00000470045 VANGL1Q8TAA9 524 aaPredicted RBP12.29□□□□□ -0.44
COMMD3-208ENST00000470045 RNF217Q8TC41 542 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 SLC26A7Q8TE54 656 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 MPP4Q96JB8 637 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 BDH2Q9BUT1 245 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 C1QTNF6Q9BXI9 259 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 ASPNQ9BXN1 380 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 FAIMQ9NVQ4 179 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 GID8Q9NWU2 228 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 ARMCX1Q9P291 453 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 NIPBLQ6KC79 2804 aaeCLIP12.29□□□□□ -0.44
COMMD3-208ENST00000470045 ZANQ9Y493 2812 aa12.29□□□□□ -0.44
COMMD3-208ENST00000470045 TRIM64A6NGJ6 449 aa12.28□□□□□ -0.44
COMMD3-208ENST00000470045 TRIM64BA6NI03 449 aa12.28□□□□□ -0.44
COMMD3-208ENST00000470045 H7C1Q1 480 aa12.28□□□□□ -0.44
COMMD3-208ENST00000470045 PLPP3O14495 311 aa12.28□□□□□ -0.44
COMMD3-208ENST00000470045 HLA-DOBP13765 273 aa12.28□□□□□ -0.44
COMMD3-208ENST00000470045 NQO1P15559 274 aaKnown RBP12.28□□□□□ -0.44
COMMD3-208ENST00000470045 CDH2P19022 906 aaPredicted RBP12.28□□□□□ -0.44
COMMD3-208ENST00000470045 PUDPQ08623 228 aa12.28□□□□□ -0.44
COMMD3-208ENST00000470045 ETFDHQ16134 617 aa12.28□□□□□ -0.44
COMMD3-208ENST00000470045 ZNF74Q16587 644 aa12.28□□□□□ -0.44
COMMD3-208ENST00000470045 HMBOX1Q6NT76 420 aa12.28□□□□□ -0.44
COMMD3-208ENST00000470045 ANKRD16Q6P6B7 361 aa12.28□□□□□ -0.44
COMMD3-208ENST00000470045 UEVLDQ8IX04 471 aa12.28□□□□□ -0.44
COMMD3-208ENST00000470045 PIK3C3Q8NEB9 887 aa12.28□□□□□ -0.44
COMMD3-208ENST00000470045 RP9Q8TA86 221 aaKnown RBP12.28□□□□□ -0.44
COMMD3-208ENST00000470045 RCN3Q96D15 328 aa12.28□□□□□ -0.44
COMMD3-208ENST00000470045 TRMT61AQ96FX7 289 aaKnown RBP12.28□□□□□ -0.44
COMMD3-208ENST00000470045 SMR3AQ99954 134 aa12.28□□□□□ -0.44
COMMD3-208ENST00000470045 DHRS9Q9BPW9 319 aa12.28□□□□□ -0.44
COMMD3-208ENST00000470045 PRSS27Q9BQR3 290 aa12.28□□□□□ -0.44
COMMD3-208ENST00000470045 SLC19A3Q9BZV2 496 aa12.28□□□□□ -0.44
COMMD3-208ENST00000470045 CRNNQ9UBG3 495 aaPredicted RBP12.28□□□□□ -0.44
COMMD3-208ENST00000470045 BAG5Q9UL15 447 aa12.28□□□□□ -0.44
COMMD3-208ENST00000470045 SLC7A7Q9UM01 511 aa12.28□□□□□ -0.44
COMMD3-208ENST00000470045 NOX1Q9Y5S8 564 aa12.28□□□□□ -0.44
COMMD3-208ENST00000470045 ALPK2Q86TB3 2170 aa12.28□□□□□ -0.44
COMMD3-208ENST00000470045 ZFHX3Q15911 3703 aa12.27□□□□□ -0.45
COMMD3-208ENST00000470045 IGHV1-18A0A0C4DH31 117 aa12.27□□□□□ -0.45
COMMD3-208ENST00000470045 TTKP33981 857 aa12.27□□□□□ -0.45
COMMD3-208ENST00000470045 CDKN1AP38936 164 aa12.27□□□□□ -0.45
COMMD3-208ENST00000470045 POU3F1Q03052 451 aaPredicted RBP12.27□□□□□ -0.45
COMMD3-208ENST00000470045 PMS2P3Q13401 168 aa12.27□□□□□ -0.45
COMMD3-208ENST00000470045 C3orf36Q3SXR2 165 aa12.27□□□□□ -0.45
COMMD3-208ENST00000470045 AGAP6Q5VW22 663 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms