RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 KLHL36Q8N4N3 616 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 NDNFQ8TB73 568 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 ZBTB8AQ96BR9 441 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 NTNG2Q96CW9 530 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 IP6K3Q96PC2 410 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 ZNF649Q9BS31 505 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 JAM3Q9BX67 310 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 NMNAT2Q9BZQ4 307 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 HAO2Q9NYQ3 351 aa16.35■□□□□ 0.21
SMC4-211ENST00000469858 SPIN1Q9Y657 262 aaPredicted RBP16.35■□□□□ 0.21
SMC4-211ENST00000469858 A0A0G2JMM0 328 aa16.34■□□□□ 0.21
SMC4-211ENST00000469858 LOC100506127A0A0U1RQW1 187 aa16.34■□□□□ 0.21
SMC4-211ENST00000469858 A0A1W2PPB8 328 aa16.34■□□□□ 0.21
SMC4-211ENST00000469858 A0A1W2PRS3 328 aa16.34■□□□□ 0.21
SMC4-211ENST00000469858 KIR3DP1A8MWS1 328 aa16.34■□□□□ 0.21
SMC4-211ENST00000469858 SNX4O95219 450 aa16.34■□□□□ 0.21
SMC4-211ENST00000469858 TGFBR1P36897 503 aa16.34■□□□□ 0.21
SMC4-211ENST00000469858 MFSD13AQ14CX5 517 aa16.34■□□□□ 0.21
SMC4-211ENST00000469858 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.34■□□□□ 0.212e-41■■■■■ 207.1
SMC4-211ENST00000469858 LCN1P1Q5VSP4 162 aa16.34■□□□□ 0.21
SMC4-211ENST00000469858 TIGD3Q6B0B8 471 aa16.34■□□□□ 0.21
SMC4-211ENST00000469858 ATCAYQ86WG3 371 aa16.34■□□□□ 0.21
SMC4-211ENST00000469858 GALNT15Q8N3T1 639 aa16.34■□□□□ 0.21
SMC4-211ENST00000469858 SMAP2Q8WU79 429 aaPredicted RBP16.34■□□□□ 0.21
SMC4-211ENST00000469858 ZNRF4Q8WWF5 429 aa16.34■□□□□ 0.21
SMC4-211ENST00000469858 UBL7Q96S82 380 aaPredicted RBP16.34■□□□□ 0.21
SMC4-211ENST00000469858 POTEKPQ9BYX7 375 aa16.34■□□□□ 0.21
SMC4-211ENST00000469858 SACM1LQ9NTJ5 587 aa16.34■□□□□ 0.21
SMC4-211ENST00000469858 TEKT2Q9UIF3 430 aa16.34■□□□□ 0.21
SMC4-211ENST00000469858 DKKL1Q9UK85 242 aa16.34■□□□□ 0.21
SMC4-211ENST00000469858 CORINQ9Y5Q5 1042 aa16.34■□□□□ 0.21
SMC4-211ENST00000469858 MED12Q93074 2177 aa16.34■□□□□ 0.21
SMC4-211ENST00000469858 FREM3P0C091 2139 aa16.33■□□□□ 0.21
SMC4-211ENST00000469858 MED13Q9UHV7 2174 aa16.33■□□□□ 0.21
SMC4-211ENST00000469858 A0A087WZY1 265 aa16.33■□□□□ 0.21
SMC4-211ENST00000469858 PNMA8CA0A1B0GUJ8 204 aa16.33■□□□□ 0.21
SMC4-211ENST00000469858 DAPL1A0PJW8 107 aa16.33■□□□□ 0.21
SMC4-211ENST00000469858 ADH6P28332 368 aa16.33■□□□□ 0.21
SMC4-211ENST00000469858 DSCR4P56555 118 aaPredicted RBP16.33■□□□□ 0.21
SMC4-211ENST00000469858 C19orf57Q0VDD7 668 aa16.33■□□□□ 0.21
SMC4-211ENST00000469858 POU4F2Q12837 409 aa16.33■□□□□ 0.21
SMC4-211ENST00000469858 MYBPHQ13203 477 aa16.33■□□□□ 0.21
SMC4-211ENST00000469858 PON3Q15166 354 aa16.33■□□□□ 0.21
SMC4-211ENST00000469858 ATP1A1-AS1Q5TC04 95 aa16.33■□□□□ 0.21
SMC4-211ENST00000469858 ABHD17BQ5VST6 288 aa16.33■□□□□ 0.21
SMC4-211ENST00000469858 LIPKQ5VXJ0 399 aa16.33■□□□□ 0.21
SMC4-211ENST00000469858 KDM8Q8N371 416 aa16.33■□□□□ 0.21
SMC4-211ENST00000469858 OR6K6Q8NGW6 343 aa16.33■□□□□ 0.21
SMC4-211ENST00000469858 SMPDL3BQ92485 455 aa16.33■□□□□ 0.21
SMC4-211ENST00000469858 TM9SF4Q92544 642 aa16.33■□□□□ 0.21
SMC4-211ENST00000469858 TMEM41AQ96HV5 264 aa16.33■□□□□ 0.21
SMC4-211ENST00000469858 TSSK2Q96PF2 358 aa16.33■□□□□ 0.21
SMC4-211ENST00000469858 CHCHD6Q9BRQ6 235 aa16.33■□□□□ 0.21
SMC4-211ENST00000469858 LIPT2A6NK58 231 aa16.33■□□□□ 0.2
SMC4-211ENST00000469858 SFTPDP35247 375 aa16.33■□□□□ 0.2
SMC4-211ENST00000469858 RPS3AP61247 264 aaKnown RBP16.33■□□□□ 0.2
SMC4-211ENST00000469858 AIMP2Q13155 320 aaKnown RBP16.33■□□□□ 0.2
SMC4-211ENST00000469858 SELENBP1Q13228 472 aa16.33■□□□□ 0.2
SMC4-211ENST00000469858 ACKR1Q16570 336 aa16.33■□□□□ 0.2
SMC4-211ENST00000469858 SOWAHCQ53LP3 525 aaPredicted RBP16.33■□□□□ 0.2
SMC4-211ENST00000469858 ZNF227Q86WZ6 799 aa16.33■□□□□ 0.2
SMC4-211ENST00000469858 ZNF485Q8NCK3 441 aa16.33■□□□□ 0.2
SMC4-211ENST00000469858 SPRYD4Q8WW59 207 aaPredicted RBP16.33■□□□□ 0.2
SMC4-211ENST00000469858 ADAMTS14Q8WXS8 1223 aa16.33■□□□□ 0.2
SMC4-211ENST00000469858 NXPE2Q96DL1 559 aa16.33■□□□□ 0.2
SMC4-211ENST00000469858 OR5B2Q96R09 309 aa16.33■□□□□ 0.2
SMC4-211ENST00000469858 ARHGAP9Q9BRR9 750 aa16.33■□□□□ 0.2
SMC4-211ENST00000469858 ALG8Q9BVK2 526 aa16.33■□□□□ 0.2
SMC4-211ENST00000469858 FAM171A2A8MVW0 826 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 XKRYO14609 159 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 ARHGEF9O43307 516 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 SHC1P29353 583 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 PYCR1P32322 319 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 NAA10P41227 235 aaPredicted RBP16.32■□□□□ 0.2
SMC4-211ENST00000469858 GPR85P60893 370 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 TLE3Q04726 772 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 PUDPQ08623 228 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 SLC35D3Q5M8T2 416 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 RAET1LQ5VY80 246 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 C19orf48Q6RUI8 117 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 H1FNTQ75WM6 255 aaPredicted RBP16.32■□□□□ 0.2
SMC4-211ENST00000469858 VASH2Q86V25 355 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 PHC2Q8IXK0 858 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 GPALPP1Q8IXQ4 340 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 ARIH2OSQ8N7S6 290 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 SCAIQ8N9R8 606 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 CLEC1AQ8NC01 280 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 OR52N1Q8NH53 320 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 FER1L6-AS2Q96M78 137 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 CNN2Q99439 309 aaKnown RBP16.32■□□□□ 0.2
SMC4-211ENST00000469858 CHST11Q9NPF2 352 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 ALKBH4Q9NXW9 302 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 LRFN1Q9P244 771 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 ALPK2Q86TB3 2170 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 NCKAP5O14513 1909 aa16.32■□□□□ 0.2
SMC4-211ENST00000469858 A0A1W2PNR3 127 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 AHCYL1O43865 530 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 TRIM3O75382 744 aaPredicted RBP16.31■□□□□ 0.2
SMC4-211ENST00000469858 AKR7A3O95154 331 aa16.31■□□□□ 0.2
SMC4-211ENST00000469858 RENP00797 406 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms