RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 CSNK1EP49674 416 aaKnown RBP13.35□□□□□ -0.27
CBWD3-205ENST00000469687 ZNF117Q03924 483 aa13.35□□□□□ -0.27
CBWD3-205ENST00000469687 C14orf28Q4W4Y0 310 aa13.35□□□□□ -0.27
CBWD3-205ENST00000469687 MESTQ5EB52 335 aa13.35□□□□□ -0.27
CBWD3-205ENST00000469687 BCL2L15Q5TBC7 163 aa13.35□□□□□ -0.27
CBWD3-205ENST00000469687 UNQ9370/PRO34162Q6UXP9 181 aa13.35□□□□□ -0.27
CBWD3-205ENST00000469687 CEP76Q8TAP6 659 aa13.35□□□□□ -0.27
CBWD3-205ENST00000469687 RPS4Y2Q8TD47 263 aa13.35□□□□□ -0.27
CBWD3-205ENST00000469687 GCDHQ92947 438 aaPredicted RBP13.35□□□□□ -0.27
CBWD3-205ENST00000469687 SLC46A1Q96NT5 459 aa13.35□□□□□ -0.27
CBWD3-205ENST00000469687 TSPAN32Q96QS1 320 aa13.35□□□□□ -0.27
CBWD3-205ENST00000469687 PELOQ9BRX2 385 aaKnown RBP13.35□□□□□ -0.27
CBWD3-205ENST00000469687 FOXQ1Q9C009 403 aa13.35□□□□□ -0.27
CBWD3-205ENST00000469687 RXFP3Q9NSD7 469 aa13.35□□□□□ -0.27
CBWD3-205ENST00000469687 NUDT15Q9NV35 164 aa13.35□□□□□ -0.27
CBWD3-205ENST00000469687 ABRACLQ9P1F3 81 aa13.35□□□□□ -0.27
CBWD3-205ENST00000469687 VPS13AQ96RL7 3174 aa13.35□□□□□ -0.27
CBWD3-205ENST00000469687 COL5A1P20908 1838 aaPredicted RBP13.35□□□□□ -0.27
CBWD3-205ENST00000469687 NUP210LQ5VU65 1888 aa13.35□□□□□ -0.27
CBWD3-205ENST00000469687 A0A0A6YYJ9 748 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 ANKRD61A6NGH8 418 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 LMO7DNF2Z398 122 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 GATBO75879 557 aaKnown RBP13.34□□□□□ -0.27
CBWD3-205ENST00000469687 CLDN12P56749 244 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 RPL6Q02878 288 aaKnown RBP13.34□□□□□ -0.27
CBWD3-205ENST00000469687 UBXN2BQ14CS0 331 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 CCDC58Q4VC31 144 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 SIAH3Q8IW03 269 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 C9orf40Q8IXQ3 194 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 OR1L3Q8NH93 324 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 ZNF671Q8TAW3 534 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 FAM174AQ8TBP5 190 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 ZDHHC12Q96GR4 267 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 MSANTD3Q96H12 275 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.34□□□□□ -0.27
CBWD3-205ENST00000469687 AUNIPQ9H7T9 357 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 MRM2Q9UI43 246 aaKnown RBP13.34□□□□□ -0.27
CBWD3-205ENST00000469687 WDR87Q6ZQQ6 2873 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 FRG2CA6NGY1 282 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 H3BSH0 61 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 KHNYNO15037 678 aaKnown RBP13.34□□□□□ -0.27
CBWD3-205ENST00000469687 HCRTR2O43614 444 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 UBL3O95164 117 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 FAPQ12884 760 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 IL10RAQ13651 578 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 C1orf189Q5VU69 101 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 OVCH1Q7RTY7 1134 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 MARCH3Q86UD3 253 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 OR6V1Q8N148 313 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 ZNF433Q8N7K0 673 aaPredicted RBP13.34□□□□□ -0.27
CBWD3-205ENST00000469687 LIPHQ8WWY8 451 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 EXOSC3Q9NQT5 275 aaKnown RBP13.34□□□□□ -0.27
CBWD3-205ENST00000469687 ING1Q9UK53 422 aaPredicted RBP13.34□□□□□ -0.27
CBWD3-205ENST00000469687 SPATA2Q9UM82 520 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 ZNF281Q9Y2X9 895 aa13.34□□□□□ -0.27
CBWD3-205ENST00000469687 PCDHGA9Q9Y5G4 932 aaKnown RBP13.34□□□□□ -0.27
CBWD3-205ENST00000469687 ZNF879B4DU55 563 aa13.33□□□□□ -0.28
CBWD3-205ENST00000469687 ANKRD34CP0C6C1 535 aa13.33□□□□□ -0.28
CBWD3-205ENST00000469687 FOLR1P15328 257 aa13.33□□□□□ -0.28
CBWD3-205ENST00000469687 CCR6P51684 374 aa13.33□□□□□ -0.28
CBWD3-205ENST00000469687 NR0B1P51843 470 aaKnown RBP13.33□□□□□ -0.28
CBWD3-205ENST00000469687 TDGQ13569 410 aa13.33□□□□□ -0.28
CBWD3-205ENST00000469687 EBPQ15125 230 aaKnown RBP13.33□□□□□ -0.28
CBWD3-205ENST00000469687 YIF1BQ5BJH7 314 aa13.33□□□□□ -0.28
CBWD3-205ENST00000469687 OGFOD3Q6PK18 319 aa13.33□□□□□ -0.28
CBWD3-205ENST00000469687 NANOGNBQ7Z5D8 188 aa13.33□□□□□ -0.28
CBWD3-205ENST00000469687 TIGD4Q8IY51 512 aa13.33□□□□□ -0.28
CBWD3-205ENST00000469687 TDHQ8IZJ6 230 aa13.33□□□□□ -0.28
CBWD3-205ENST00000469687 CMTM4Q8IZR5 234 aa13.33□□□□□ -0.28
CBWD3-205ENST00000469687 TOMM5Q8N4H5 51 aa13.33□□□□□ -0.28
CBWD3-205ENST00000469687 WDR76Q9H967 626 aa13.33□□□□□ -0.28
CBWD3-205ENST00000469687 FKRPQ9H9S5 495 aa13.33□□□□□ -0.28
CBWD3-205ENST00000469687 GRHPRQ9UBQ7 328 aa13.33□□□□□ -0.28
CBWD3-205ENST00000469687 DMDP11532 3685 aa13.33□□□□□ -0.28
CBWD3-205ENST00000469687 TRIM3O75382 744 aaPredicted RBP13.32□□□□□ -0.28
CBWD3-205ENST00000469687 UPK3AO75631 287 aa13.32□□□□□ -0.28
CBWD3-205ENST00000469687 CD1AP06126 327 aa13.32□□□□□ -0.28
CBWD3-205ENST00000469687 GIFP27352 417 aa13.32□□□□□ -0.28
CBWD3-205ENST00000469687 CSF2RBP32927 897 aa13.32□□□□□ -0.28
CBWD3-205ENST00000469687 GZMKP49863 264 aa13.32□□□□□ -0.28
CBWD3-205ENST00000469687 MMP15P51511 669 aa13.32□□□□□ -0.28
CBWD3-205ENST00000469687 SLC25A1P53007 311 aa13.32□□□□□ -0.28
CBWD3-205ENST00000469687 NXPH1P58417 271 aa13.32□□□□□ -0.28
CBWD3-205ENST00000469687 HNRNPKP61978 463 aaKnown RBP eCLIP13.32□□□□□ -0.28
CBWD3-205ENST00000469687 NDUFA5Q16718 116 aa13.32□□□□□ -0.28
CBWD3-205ENST00000469687 LIPNQ5VXI9 398 aa13.32□□□□□ -0.28
CBWD3-205ENST00000469687 SLC16A9Q7RTY1 509 aa13.32□□□□□ -0.28
CBWD3-205ENST00000469687 SERPINA12Q8IW75 414 aa13.32□□□□□ -0.28
CBWD3-205ENST00000469687 AKAP1Q92667 903 aaKnown RBP eCLIP13.32□□□□□ -0.28
CBWD3-205ENST00000469687 MAP6Q96JE9 813 aa13.32□□□□□ -0.28
CBWD3-205ENST00000469687 FOXN4Q96NZ1 517 aa13.32□□□□□ -0.28
CBWD3-205ENST00000469687 TTYH1Q9H313 450 aaPredicted RBP13.32□□□□□ -0.28
CBWD3-205ENST00000469687 FRRS1LQ9P0K9 344 aa13.32□□□□□ -0.28
CBWD3-205ENST00000469687 EPHA6Q9UF33 1036 aa13.32□□□□□ -0.28
CBWD3-205ENST00000469687 MMACHCQ9Y4U1 282 aa13.32□□□□□ -0.28
CBWD3-205ENST00000469687 IGHV1OR21-1A0A087WYE8 117 aa13.32□□□□□ -0.28
CBWD3-205ENST00000469687 C11orf98E9PRG8 122 aa13.32□□□□□ -0.28
CBWD3-205ENST00000469687 AKR7A3O95154 331 aa13.32□□□□□ -0.28
CBWD3-205ENST00000469687 ABHD16AO95870 558 aa13.32□□□□□ -0.28
CBWD3-205ENST00000469687 ITPKBP27987 946 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms