RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 RBM45Q8IUH3 476 aaKnown RBP16■□□□□ 0.15
PHGDH-204ENST00000469443 SCAIQ8N9R8 606 aa16■□□□□ 0.15
PHGDH-204ENST00000469443 OR4D11Q8NGI4 311 aa16■□□□□ 0.15
PHGDH-204ENST00000469443 VANGL1Q8TAA9 524 aaPredicted RBP16■□□□□ 0.15
PHGDH-204ENST00000469443 C10orf82Q8WW14 230 aa16■□□□□ 0.15
PHGDH-204ENST00000469443 GTPBP3Q969Y2 492 aaKnown RBP16■□□□□ 0.15
PHGDH-204ENST00000469443 TRMT61AQ96FX7 289 aaKnown RBP16■□□□□ 0.15
PHGDH-204ENST00000469443 COX4I2Q96KJ9 171 aa16■□□□□ 0.15
PHGDH-204ENST00000469443 TRAF4Q9BUZ4 470 aaPredicted RBP16■□□□□ 0.15
PHGDH-204ENST00000469443 ASPNQ9BXN1 380 aa16■□□□□ 0.15
PHGDH-204ENST00000469443 OBP2BQ9NPH6 170 aa16■□□□□ 0.15
PHGDH-204ENST00000469443 FAIMQ9NVQ4 179 aa16■□□□□ 0.15
PHGDH-204ENST00000469443 GID8Q9NWU2 228 aa16■□□□□ 0.15
PHGDH-204ENST00000469443 POU2F3Q9UKI9 436 aa16■□□□□ 0.15
PHGDH-204ENST00000469443 NIPBLQ6KC79 2804 aaeCLIP16■□□□□ 0.15
PHGDH-204ENST00000469443 MS4A18H0YCH9 400 aa15.99■□□□□ 0.15
PHGDH-204ENST00000469443 TRAF3IP2O43734 574 aaPredicted RBP15.99■□□□□ 0.15
PHGDH-204ENST00000469443 ROR2Q01974 943 aaKnown RBP15.99■□□□□ 0.15
PHGDH-204ENST00000469443 SPOCK1Q08629 439 aa15.99■□□□□ 0.15
PHGDH-204ENST00000469443 VEZF1Q14119 521 aa15.99■□□□□ 0.15
PHGDH-204ENST00000469443 MS4A18Q3C1V0 323 aa15.99■□□□□ 0.15
PHGDH-204ENST00000469443 TBRG1Q3YBR2 411 aa15.99■□□□□ 0.15
PHGDH-204ENST00000469443 ERICH5Q6P6B1 374 aa15.99■□□□□ 0.15
PHGDH-204ENST00000469443 DEPDC4Q8N2C3 294 aa15.99■□□□□ 0.15
PHGDH-204ENST00000469443 ADAMTS16Q8TE57 1224 aa15.99■□□□□ 0.15
PHGDH-204ENST00000469443 ZNF583Q96ND8 569 aa15.99■□□□□ 0.15
PHGDH-204ENST00000469443 MOGAT1Q96PD6 335 aa15.99■□□□□ 0.15
PHGDH-204ENST00000469443 ZNF317Q96PQ6 595 aaPredicted RBP15.99■□□□□ 0.15
PHGDH-204ENST00000469443 GRIP2Q9C0E4 1043 aa15.99■□□□□ 0.15
PHGDH-204ENST00000469443 PCDHAC1Q9H158 963 aa15.99■□□□□ 0.15
PHGDH-204ENST00000469443 ALG2Q9H553 416 aa15.99■□□□□ 0.15
PHGDH-204ENST00000469443 MRPL39Q9NYK5 338 aaKnown RBP15.99■□□□□ 0.15
PHGDH-204ENST00000469443 TRAPPC13A5PLN9 417 aa15.98■□□□□ 0.15
PHGDH-204ENST00000469443 E7EQL1 145 aa15.98■□□□□ 0.15
PHGDH-204ENST00000469443 RPL36A-HNRNPH2H7BZ11 118 aa15.98■□□□□ 0.15
PHGDH-204ENST00000469443 H7C1Q1 480 aa15.98■□□□□ 0.15
PHGDH-204ENST00000469443 LYPD3O95274 346 aa15.98■□□□□ 0.15
PHGDH-204ENST00000469443 HPRP00739 348 aa15.98■□□□□ 0.15
PHGDH-204ENST00000469443 MT-ATP6P00846 226 aa15.98■□□□□ 0.15
PHGDH-204ENST00000469443 CD8AP01732 235 aa15.98■□□□□ 0.15
PHGDH-204ENST00000469443 CDKN1AP38936 164 aa15.98■□□□□ 0.15
PHGDH-204ENST00000469443 SH3BGRP55822 239 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-204ENST00000469443 PMS2P3Q13401 168 aa15.98■□□□□ 0.15
PHGDH-204ENST00000469443 ARFGEF3Q5TH69 2177 aa15.98■□□□□ 0.15
PHGDH-204ENST00000469443 WDR88Q6ZMY6 472 aa15.98■□□□□ 0.15
PHGDH-204ENST00000469443 UEVLDQ8IX04 471 aa15.98■□□□□ 0.15
PHGDH-204ENST00000469443 GPR137CQ8N3F9 429 aa15.98■□□□□ 0.15
PHGDH-204ENST00000469443 C10orf53Q8N6V4 93 aa15.98■□□□□ 0.15
PHGDH-204ENST00000469443 ANKK1Q8NFD2 765 aa15.98■□□□□ 0.15
PHGDH-204ENST00000469443 MAGEE2Q8TD90 523 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-204ENST00000469443 BCL2L2Q92843 193 aaPredicted RBP15.98■□□□□ 0.15
PHGDH-204ENST00000469443 OR2M2Q96R28 347 aa15.98■□□□□ 0.15
PHGDH-204ENST00000469443 SMR3AQ99954 134 aa15.98■□□□□ 0.15
PHGDH-204ENST00000469443 DHRS9Q9BPW9 319 aa15.98■□□□□ 0.15
PHGDH-204ENST00000469443 ARMCX1Q9P291 453 aa15.98■□□□□ 0.15
PHGDH-204ENST00000469443 USP22Q9UPT9 525 aa15.98■□□□□ 0.15
PHGDH-204ENST00000469443 TRIM64A6NGJ6 449 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 TRIM64BA6NI03 449 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 LRRN3E7EW58 273 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 ATP8B1O43520 1251 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 THY1P04216 161 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 HLA-DOBP13765 273 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 PAX7P23759 505 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 UBE2NP61088 152 aaKnown RBP15.97■□□□□ 0.15
PHGDH-204ENST00000469443 PUDPQ08623 228 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 ETFDHQ16134 617 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 AGAP6Q5VW22 663 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 ANKRD16Q6P6B7 361 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 TTC33Q6PID6 262 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-204ENST00000469443 B3GLCTQ6Y288 498 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 TSPYL5Q86VY4 417 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-204ENST00000469443 CIARTQ8N365 385 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-204ENST00000469443 PIK3C3Q8NEB9 887 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 PROX1Q92786 737 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 RCN3Q96D15 328 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 MPP4Q96JB8 637 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 FKRPQ9H9S5 495 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 GPR35Q9HC97 309 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 BAG5Q9UL15 447 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 SLC7A7Q9UM01 511 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 NOX1Q9Y5S8 564 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 NSD1Q96L73 2696 aaPredicted RBP15.97■□□□□ 0.15
PHGDH-204ENST00000469443 TLN2Q9Y4G6 2542 aa15.97■□□□□ 0.15
PHGDH-204ENST00000469443 ZANQ9Y493 2812 aa15.96■□□□□ 0.15
PHGDH-204ENST00000469443 CR1P17927 2039 aa15.96■□□□□ 0.15
PHGDH-204ENST00000469443 ARPC4-TTLL3A0A0A6YYG9 625 aa15.96■□□□□ 0.15
PHGDH-204ENST00000469443 FAM171A2A8MVW0 826 aa15.96■□□□□ 0.15
PHGDH-204ENST00000469443 FAM220BPB1ANY3 271 aa15.96■□□□□ 0.15
PHGDH-204ENST00000469443 PLPP3O14495 311 aa15.96■□□□□ 0.15
PHGDH-204ENST00000469443 HOXB1P14653 301 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-204ENST00000469443 TTKP33981 857 aa15.96■□□□□ 0.15
PHGDH-204ENST00000469443 POU3F1Q03052 451 aaPredicted RBP15.96■□□□□ 0.15
PHGDH-204ENST00000469443 NHLRC1Q6VVB1 395 aa15.96■□□□□ 0.15
PHGDH-204ENST00000469443 CARM1Q86X55 608 aa15.96■□□□□ 0.15
PHGDH-204ENST00000469443 TMEM123Q8N131 208 aa15.96■□□□□ 0.15
PHGDH-204ENST00000469443 POU5F2Q8N7G0 328 aa15.96■□□□□ 0.15
PHGDH-204ENST00000469443 OR5J2Q8NH18 312 aa15.96■□□□□ 0.15
PHGDH-204ENST00000469443 RP9Q8TA86 221 aaKnown RBP15.96■□□□□ 0.15
PHGDH-204ENST00000469443 NELFAQ9H3P2 528 aa15.96■□□□□ 0.15
PHGDH-204ENST00000469443 SH3GLB1Q9Y371 365 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms