RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 ENTPD5O75356 428 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 SMNDC1O75940 238 aaKnown RBP eCLIP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 PLGP00747 810 aaPredicted RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 BGLAPP02818 100 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 THY1P04216 161 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 FABP3P05413 133 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 H1F0P07305 194 aaKnown RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 TFPIP10646 304 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 IMPDH2P12268 514 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 NR2C1P13056 603 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 APEHP13798 732 aaKnown RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 PPP3CBP16298 524 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 NCK1P16333 377 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 PSMB1P20618 241 aaKnown RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 COX5AP20674 150 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 ATP6V1B2P21281 511 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 FPR1P21462 350 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 FPR3P25089 353 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 GTF2E2P29084 291 aaKnown RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 AGTR1P30556 359 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 SFTPDP35247 375 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 IFNGR2P38484 337 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 KIR2DL2P43627 348 aaPredicted RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 OR1E2P47887 323 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 OR3A2P47893 321 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 LIMS1P48059 325 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 SLC9A3P48764 834 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 ASCL1P50553 236 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 TPD52P55327 224 aaPredicted RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 PRPS1P60891 318 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 ACTR3P61158 418 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 RPS4XP62701 263 aaKnown RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 VLDLRP98155 873 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 HOXC5Q00444 222 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 MS4A2Q01362 244 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 CHRNB3Q05901 458 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 TFF3Q07654 80 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 PUDPQ08623 228 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 ZP4Q12836 540 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 PIN1Q13526 163 aaPredicted RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 TAF11Q15544 211 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 ZNF74Q16587 644 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 NRN1LQ496H8 165 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 TMEM201Q5SNT2 666 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 OTUD3Q5T2D3 398 aaPredicted RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 FAM205BPQ63HN1 556 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 RPL13AP3Q6NVV1 102 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 TTC33Q6PID6 262 aaPredicted RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 CD300LDQ6UXZ3 194 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 TFAP2EQ6VUC0 442 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 C3P1Q6ZMU1 363 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 WDR88Q6ZMY6 472 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 DEF8Q6ZN54 512 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 Q6ZT83 130 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 BEND4Q6ZU67 534 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 TMPRSS11FQ6ZWK6 438 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 P4HA3Q7Z4N8 544 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 GDF7Q7Z4P5 450 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 ABHD12BQ7Z5M8 362 aaPredicted RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 TSEN54Q7Z6J9 526 aaKnown RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 GALNT5Q7Z7M9 940 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 HMGN2P46Q86SG4 172 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 TSPYL5Q86VY4 417 aaPredicted RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 P2RY8Q86VZ1 359 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 KIF18BQ86Y91 864 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 RBM45Q8IUH3 476 aaKnown RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 CDK20Q8IZL9 346 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 C17orf78Q8N4C9 275 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 RPRMLQ8N4K4 120 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 RNF148Q8N7C7 305 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 FAM86B1Q8N7N1 296 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 C9orf106Q8NAJ2 232 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 POMGNT2Q8NAT1 580 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 NAXEQ8NCW5 288 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 C1orf162Q8NEQ5 155 aaPredicted RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 OR5M1Q8NGP8 315 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 OR10Q1Q8NGQ4 319 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 OR5J2Q8NH18 312 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 VANGL1Q8TAA9 524 aaPredicted RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 FNDC8Q8TC99 324 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 SLC7A13Q8TCU3 470 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 ABHD3Q8WU67 409 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 TMEM239Q8WW34 195 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 DNAJC9Q8WXX5 260 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 SMPDL3BQ92485 455 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 RNASE6Q93091 150 aaKnown RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 TAAR8Q969N4 342 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 SDCCAG3Q96C92 435 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 INTS12Q96CB8 462 aaKnown RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 CCDC124Q96CT7 223 aaKnown RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 STARD4Q96DR4 205 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 KTI12Q96EK9 354 aaPredicted RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 NRBF2Q96F24 287 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 ZNF845Q96IR2 970 aaPredicted RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 LRR1Q96L50 414 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 LRGUKQ96M69 825 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 ADAD1Q96M93 576 aaKnown RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 OXGR1Q96P68 337 aa3.13□□□□□ -1.91
TRIM59-202ENST00000468542 GPX7Q96SL4 187 aaPredicted RBP3.13□□□□□ -1.91
TRIM59-202ENST00000468542 SEPHS2Q99611 448 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms