RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 FAR1Q8WVX9 515 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 SLC39A7Q92504 469 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 PTP4A1Q93096 173 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 SGTBQ96EQ0 304 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 DEPPQ9NTK1 212 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 TBC1D23Q9NUY8 699 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 ANKRD10Q9NXR5 420 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 TAS2R10Q9NYW0 307 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 DNAJC27Q9NZQ0 273 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 KLRF1Q9NZS2 232 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 CEPT1Q9Y6K0 416 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 MED13Q9UHV7 2174 aa7.46□□□□□ -1.21
BRCA1-208ENST00000468300 TMED7-TICAM2A0A0A6YYA0 188 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 FTCDNL1E5RQL4 147 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 MT-ND2P03891 347 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 MAP2K4P45985 399 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 RPS5P46782 204 aaKnown RBP7.46□□□□□ -1.22
BRCA1-208ENST00000468300 POLR2HP52434 150 aaKnown RBP7.46□□□□□ -1.22
BRCA1-208ENST00000468300 GP2P55259 537 aaKnown RBP7.46□□□□□ -1.22
BRCA1-208ENST00000468300 LGALS3BPQ08380 585 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 FOXF1Q12946 379 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 OPN5Q6U736 354 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 FAM122BQ7Z309 247 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 OAFQ86UD1 273 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 ASB15Q8WXK1 588 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 KIAA1143Q96AT1 154 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-208ENST00000468300 THOC3Q96J01 351 aaKnown RBP7.46□□□□□ -1.22
BRCA1-208ENST00000468300 UBL7Q96S82 380 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-208ENST00000468300 GPX7Q96SL4 187 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-208ENST00000468300 SRA1Q9HD15 236 aaKnown RBP7.46□□□□□ -1.22
BRCA1-208ENST00000468300 TAS2R5Q9NYW4 299 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 RBMX2Q9Y388 322 aaKnown RBP7.46□□□□□ -1.22
BRCA1-208ENST00000468300 TMED7Q9Y3B3 224 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 PINLYPA6NC86 204 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 IMPA2O14732 288 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 SUSD5O60279 629 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 MPZL2O60487 215 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 CIDEAO60543 219 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 CDK1P06493 297 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 SAGP10523 405 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-208ENST00000468300 DBTP11182 482 aaKnown RBP7.46□□□□□ -1.22
BRCA1-208ENST00000468300 SLC2A5P22732 501 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 GRK5P34947 590 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 FOXK2Q01167 660 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 VASH2Q86V25 355 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 IGFN1Q86VF2 1251 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 WDFY1Q8IWB7 410 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 DND1Q8IYX4 353 aaKnown RBP7.46□□□□□ -1.22
BRCA1-208ENST00000468300 OR2T33Q8NG76 320 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 ST8SIA1Q92185 356 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 KISS1RQ969F8 398 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-208ENST00000468300 MUL1Q969V5 352 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 C1GALT1C1Q96EU7 318 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 DNAJA3Q96EY1 480 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 LRR1Q96L50 414 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 ZNF649Q9BS31 505 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 TAPBPLQ9BX59 468 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 OR11A1Q9GZK7 315 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 METTL7AQ9H8H3 244 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 KRCC1Q9NPI7 259 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-208ENST00000468300 MRPS18AQ9NVS2 196 aaKnown RBP7.46□□□□□ -1.22
BRCA1-208ENST00000468300 IMPAD1Q9NX62 359 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 TAS2R16Q9NYV7 291 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 HIF3AQ9Y2N7 669 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 ZNF337Q9Y3M9 751 aa7.46□□□□□ -1.22
BRCA1-208ENST00000468300 J3QRE1 110 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 EFSO43281 561 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 FAM20BO75063 409 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 NEURL1O76050 574 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 SEC14L2O76054 403 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 LIPCP11150 499 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 RAB14P61106 215 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 RAB39AQ14964 217 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 TIGD6Q17RP2 521 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 AHSA2Q719I0 299 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 PRSS48Q7RTY5 328 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 OR13F1Q8NGS4 319 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 ZNRF4Q8WWF5 429 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 CRELD1Q96HD1 420 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 CEP19Q96LK0 163 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 LHPPQ9H008 270 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 NRIP3Q9NQ35 241 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 HINT3Q9NQE9 182 aaKnown RBP7.45□□□□□ -1.22
BRCA1-208ENST00000468300 PPP4R1LQ9P1A2 415 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 VDAC3Q9Y277 283 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 ADAM18Q9Y3Q7 739 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 DMXL2Q8TDJ6 3036 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 CCDC182A6NF36 153 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 LRRC3CA6NJW4 275 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 G3V3Y1 287 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 H3BSA7 217 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 ZIC3O60481 467 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 HCN1O60741 890 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 PPP1R3DO95685 299 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 STSP08842 583 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 PRKAR1AP10644 381 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 PIPP12273 146 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-208ENST00000468300 GP1BBP13224 206 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 MSX1P28360 303 aa7.45□□□□□ -1.22
BRCA1-208ENST00000468300 RBMS1P29558 406 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms