RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 FAM214BQ7L5A3 538 aa13.54□□□□□ -0.24
SNIP1-202ENST00000468040 GCNT2Q8N0V5 402 aa13.54□□□□□ -0.24
SNIP1-202ENST00000468040 FANK1Q8TC84 345 aa13.54□□□□□ -0.24
SNIP1-202ENST00000468040 INTS12Q96CB8 462 aaKnown RBP13.54□□□□□ -0.24
SNIP1-202ENST00000468040 TNFRSF13CQ96RJ3 184 aa13.54□□□□□ -0.24
SNIP1-202ENST00000468040 NIPSNAP1Q9BPW8 284 aa13.54□□□□□ -0.24
SNIP1-202ENST00000468040 C9orf16Q9BUW7 83 aa13.54□□□□□ -0.24
SNIP1-202ENST00000468040 SFXN3Q9BWM7 321 aa13.54□□□□□ -0.24
SNIP1-202ENST00000468040 UCK2Q9BZX2 261 aa13.54□□□□□ -0.24
SNIP1-202ENST00000468040 MCCC2Q9HCC0 563 aa13.54□□□□□ -0.24
SNIP1-202ENST00000468040 ING1Q9UK53 422 aaPredicted RBP13.54□□□□□ -0.24
SNIP1-202ENST00000468040 SLC5A6Q9Y289 635 aa13.54□□□□□ -0.24
SNIP1-202ENST00000468040 MAGED1Q9Y5V3 778 aaPredicted RBP13.54□□□□□ -0.24
SNIP1-202ENST00000468040 PHF3Q92576 2039 aaKnown RBP13.54□□□□□ -0.24
SNIP1-202ENST00000468040 A0A1W2PRG6 482 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 C11orf98E9PRG8 122 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 AKAP8O43823 692 aaKnown RBP13.53□□□□□ -0.24
SNIP1-202ENST00000468040 PTP4A3O75365 173 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 NDUFB2O95178 105 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 IL18BPO95998 194 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 HPRP00739 348 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 PLA2G2AP14555 144 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 CTSSP25774 331 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 AGTR1P30556 359 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 OPRM1P35372 400 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 POU3F1Q03052 451 aaPredicted RBP13.53□□□□□ -0.24
SNIP1-202ENST00000468040 RIPK1Q13546 671 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 FHL1Q13642 323 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 ESPL1Q14674 2120 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 SMARCD3Q6STE5 483 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 RASSF6Q6ZTQ3 369 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 CREB3L2Q70SY1 520 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 EPHX4Q8IUS5 362 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 TUSC5Q8IXB3 177 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 KDM8Q8N371 416 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 CLDN22Q8N7P3 220 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 CNEP1R1Q8N9A8 125 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 MOSPD2Q8NHP6 518 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 EME1Q96AY2 570 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 CIB1Q99828 191 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 RBM4BQ9BQ04 359 aaKnown RBP13.53□□□□□ -0.24
SNIP1-202ENST00000468040 RBM4Q9BWF3 364 aaKnown RBP13.53□□□□□ -0.24
SNIP1-202ENST00000468040 RNPEPL1Q9HAU8 725 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 PAPOLBQ9NRJ5 636 aaKnown RBP13.53□□□□□ -0.24
SNIP1-202ENST00000468040 INIPQ9NRY2 104 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 COQ3Q9NZJ6 369 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 ZNF629Q9UEG4 869 aaPredicted RBP13.53□□□□□ -0.24
SNIP1-202ENST00000468040 CLEC4AQ9UMR7 237 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 POFUT2Q9Y2G5 429 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 NOSIPQ9Y314 301 aaKnown RBP13.53□□□□□ -0.24
SNIP1-202ENST00000468040 FLVCR1Q9Y5Y0 555 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 CDH10Q9Y6N8 788 aa13.53□□□□□ -0.24
SNIP1-202ENST00000468040 SMG1Q96Q15 3661 aaKnown RBP13.53□□□□□ -0.24
SNIP1-202ENST00000468040 A0A0G2JNJ9 132 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 NPIPB13A6NJU9 1138 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 NPIPB4C9JG80 1138 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 MGRN1O60291 552 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 SLC6A6P31641 620 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 RPL4P36578 427 aaKnown RBP13.52□□□□□ -0.25
SNIP1-202ENST00000468040 DAP3P51398 398 aaKnown RBP13.52□□□□□ -0.25
SNIP1-202ENST00000468040 SMSP52788 366 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 PPP2R2BQ00005 443 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 RFX4Q33E94 735 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 KLHL17Q6TDP4 642 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 HDDC2Q7Z4H3 204 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 GALNT5Q7Z7M9 940 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 NAXEQ8NCW5 288 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 OR52L1Q8NGH7 329 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 OR6K3Q8NGY3 331 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 TMEM45BQ96B21 275 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 CCDC120Q96HB5 630 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 GPX7Q96SL4 187 aaPredicted RBP13.52□□□□□ -0.25
SNIP1-202ENST00000468040 OR52D1Q9H346 318 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 KRT84Q9NSB2 600 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 PARPBPQ9NWS1 579 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 IL20Q9NYY1 176 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 Q9UFV3 132 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 ENOPH1Q9UHY7 261 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 ERRFI1Q9UJM3 462 aaPredicted RBP13.52□□□□□ -0.25
SNIP1-202ENST00000468040 RCE1Q9Y256 329 aa13.52□□□□□ -0.25
SNIP1-202ENST00000468040 DOCK7Q96N67 2140 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 J3QKU1 62 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 PDLIM1O00151 329 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 DVL2O14641 736 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 TRAF3IP2O43734 574 aaPredicted RBP13.51□□□□□ -0.25
SNIP1-202ENST00000468040 MRPL33O75394 65 aaKnown RBP13.51□□□□□ -0.25
SNIP1-202ENST00000468040 SERPINI2O75830 405 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 TNFSF13O75888 250 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 F13BP05160 661 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 CD14P08571 375 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 HLA-DOBP13765 273 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 ZNF26P17031 533 aaPredicted RBP13.51□□□□□ -0.25
SNIP1-202ENST00000468040 IGFBP5P24593 272 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 KIR2DL2P43627 348 aaPredicted RBP13.51□□□□□ -0.25
SNIP1-202ENST00000468040 DAPP51397 102 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 CTXN1P60606 82 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 SIRPAP78324 504 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 SLC34A1Q06495 639 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 FOXF2Q12947 444 aa13.51□□□□□ -0.25
SNIP1-202ENST00000468040 TRIP10Q15642 601 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms