RNA–Protein interactions for RNA: ENST00000467852.1

VPS26A-204, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-204ENST00000467852 LDLRAD3Q86YD5 345 aa9.71□□□□□ -0.86
VPS26A-204ENST00000467852 KLHDC1Q8N7A1 406 aa9.71□□□□□ -0.86
VPS26A-204ENST00000467852 CHMP6Q96FZ7 201 aa9.71□□□□□ -0.86
VPS26A-204ENST00000467852 TSPAN32Q96QS1 320 aa9.71□□□□□ -0.86
VPS26A-204ENST00000467852 CCDC106Q9BWC9 280 aa9.71□□□□□ -0.86
VPS26A-204ENST00000467852 LINC00470Q9BZP3 86 aa9.71□□□□□ -0.86
VPS26A-204ENST00000467852 IQCGQ9H095 443 aaKnown RBP9.71□□□□□ -0.86
VPS26A-204ENST00000467852 MIEF1Q9NQG6 463 aa9.71□□□□□ -0.86
VPS26A-204ENST00000467852 RNF14Q9UBS8 474 aa9.71□□□□□ -0.86
VPS26A-204ENST00000467852 SNX6Q9UNH7 406 aa9.71□□□□□ -0.86
VPS26A-204ENST00000467852 TRIM33Q9UPN9 1127 aa9.71□□□□□ -0.86
VPS26A-204ENST00000467852 KIR2DS1A0A191URI9 304 aa9.7□□□□□ -0.86
VPS26A-204ENST00000467852 OR8G3PP0DMU2 310 aa9.7□□□□□ -0.86
VPS26A-204ENST00000467852 ZNF250P15622 560 aa9.7□□□□□ -0.86
VPS26A-204ENST00000467852 ZNF14P17017 642 aaPredicted RBP9.7□□□□□ -0.86
VPS26A-204ENST00000467852 DRD4P21917 467 aa9.7□□□□□ -0.86
VPS26A-204ENST00000467852 GSTM5P46439 218 aa9.7□□□□□ -0.86
VPS26A-204ENST00000467852 ZNF81P51508 661 aa9.7□□□□□ -0.86
VPS26A-204ENST00000467852 EFNB2P52799 333 aa9.7□□□□□ -0.86
VPS26A-204ENST00000467852 FGF12P61328 243 aa9.7□□□□□ -0.86
VPS26A-204ENST00000467852 FRG1Q14331 258 aaKnown RBP9.7□□□□□ -0.86
VPS26A-204ENST00000467852 PRSS53Q2L4Q9 553 aa9.7□□□□□ -0.86
VPS26A-204ENST00000467852 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.7□□□□□ -0.86
VPS26A-204ENST00000467852 TMEM225Q6GV28 225 aa9.7□□□□□ -0.86
VPS26A-204ENST00000467852 METTL2BQ6P1Q9 378 aaKnown RBP9.7□□□□□ -0.86
VPS26A-204ENST00000467852 ZCCHC12Q6PEW1 402 aa9.7□□□□□ -0.86
VPS26A-204ENST00000467852 LRRC28Q86X40 367 aaPredicted RBP9.7□□□□□ -0.86
VPS26A-204ENST00000467852 NDUFA11Q86Y39 141 aa9.7□□□□□ -0.86
VPS26A-204ENST00000467852 ZNF563Q8TA94 476 aa9.7□□□□□ -0.86
VPS26A-204ENST00000467852 C11orf40Q8WZ69 217 aa9.7□□□□□ -0.86
VPS26A-204ENST00000467852 DPF1Q92782 380 aa9.7□□□□□ -0.86
VPS26A-204ENST00000467852 RCC1LQ96I51 464 aaKnown RBP9.7□□□□□ -0.86
VPS26A-204ENST00000467852 BRD7Q9NPI1 651 aa9.7□□□□□ -0.86
VPS26A-204ENST00000467852 B3GNT2Q9NY97 397 aa9.7□□□□□ -0.86
VPS26A-204ENST00000467852 TAS2R7Q9NYW3 318 aa9.7□□□□□ -0.86
VPS26A-204ENST00000467852 VPREB3Q9UKI3 123 aa9.7□□□□□ -0.86
VPS26A-204ENST00000467852 CHMP2BQ9UQN3 213 aa9.7□□□□□ -0.86
VPS26A-204ENST00000467852 RPL36A-HNRNPH2H7BZ11 118 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 ANGPTL7O43827 346 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 DNAJA2O60884 412 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 FBXO24O75426 580 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 JTBO76095 146 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 HLA-HP01893 362 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 IFNW1P05000 195 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 TSPAN8P19075 237 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 CCNA2P20248 432 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 RPL4P36578 427 aaKnown RBP9.69□□□□□ -0.86
VPS26A-204ENST00000467852 ELK3P41970 407 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 RAE1P78406 368 aaKnown RBP9.69□□□□□ -0.86
VPS26A-204ENST00000467852 TNP2Q05952 138 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 PIGFQ07326 219 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 HSPB3Q12988 150 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 GGTA1PQ4G0N0 100 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 CDC73Q6P1J9 531 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 C1orf122Q6ZSJ8 110 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 TMEM99Q8N816 258 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 SDR9C7Q8NEX9 313 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 CDC26Q8NHZ8 85 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 PMM1Q92871 262 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 DDIT4LQ96D03 193 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 OTUB1Q96FW1 271 aaPredicted RBP9.69□□□□□ -0.86
VPS26A-204ENST00000467852 MS4A4EQ96PG1 132 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 NUDT16L1Q9BRJ7 211 aaKnown RBP9.69□□□□□ -0.86
VPS26A-204ENST00000467852 ACTRT3Q9BYD9 372 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 PCDHGB4Q9UN71 923 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 SIGLEC9Q9Y336 463 aa9.69□□□□□ -0.86
VPS26A-204ENST00000467852 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 P2RY10O00398 339 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 TM9SF1O15321 606 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 SPRY3O43610 288 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 RAB36O95755 333 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 LCKP06239 509 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 VSIG10L2P0DP72 767 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 IMPDH2P12268 514 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 CPT2P23786 658 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 HOXD3P31249 432 aaPredicted RBP9.68□□□□□ -0.86
VPS26A-204ENST00000467852 STX2P32856 288 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 BTG1P62324 171 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 ACSM2AQ08AH3 577 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 DLG1Q12959 904 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 TRAF3Q13114 568 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 SKP2Q13309 424 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 SPIN4Q56A73 249 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 NKAPLQ5M9Q1 402 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 ACSM2BQ68CK6 577 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 ZNF551Q7Z340 670 aaPredicted RBP9.68□□□□□ -0.86
VPS26A-204ENST00000467852 GRINAQ7Z429 371 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 DDIASQ8IXT1 998 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 SCCPDHQ8NBX0 429 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 PAPD5Q8NDF8 572 aaKnown RBP9.68□□□□□ -0.86
VPS26A-204ENST00000467852 OR4F6Q8NGB9 312 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 RHEBL1Q8TAI7 183 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 ZNF519Q8TB69 540 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 DDB2Q92466 427 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 GIMAP5Q96F15 307 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 PLEKHA8Q96JA3 519 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 PCGF1Q9BSM1 259 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 GPR35Q9HC97 309 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 TXNDC16Q9P2K2 825 aa9.68□□□□□ -0.86
VPS26A-204ENST00000467852 FBXL3Q9UKT7 428 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms