RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 CSF1P09603 554 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 PET100P0DJ07 73 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 PNLIPRP2P54317 469 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 CAV3P56539 151 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 COL28A1Q2UY09 1125 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 RAB12Q6IQ22 244 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 AAED1Q7RTV5 226 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 NIPAL2Q9H841 368 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 SLC25A19Q9HC21 320 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 NRIP3Q9NQ35 241 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 SIRT5Q9NXA8 310 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 LOC285556D6RIA3 1793 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.67□□□□□ -0.38
BRAT1-203ENST00000467558 DPM1O60762 260 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 DIRAS3O95661 229 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 RAB3DO95716 219 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 DDAH2O95865 285 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 ERP29P30040 261 aaKnown RBP12.67□□□□□ -0.38
BRAT1-203ENST00000467558 CYB561P49447 251 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 PCBP4P57723 403 aaKnown RBP12.67□□□□□ -0.38
BRAT1-203ENST00000467558 P2RY14Q15391 338 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 ABI3BPQ7Z7G0 1075 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 OR2L13Q8N349 312 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 MAFAQ8NHW3 353 aaPredicted RBP12.67□□□□□ -0.38
BRAT1-203ENST00000467558 BRIX1Q8TDN6 353 aaKnown RBP12.67□□□□□ -0.38
BRAT1-203ENST00000467558 SLC6A15Q9H2J7 730 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 HIF3AQ9Y2N7 669 aa12.67□□□□□ -0.38
BRAT1-203ENST00000467558 HTR3BO95264 441 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 PCSK6P29122 969 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 APLNRP35414 380 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 ZNF425Q6IV72 752 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 C3P1Q6ZMU1 363 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 CPEB2Q7Z5Q1 589 aaKnown RBP12.66□□□□□ -0.38
BRAT1-203ENST00000467558 AMER3Q8N944 861 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 SLC5A7Q9GZV3 580 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 FBXL3Q9UKT7 428 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 CCL27Q9Y4X3 112 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 TRIOBPQ9H2D6 2365 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 PSME4Q14997 1843 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 C2orf72A6NCS6 295 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 NPIPB8E9PQR5 432 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 BMP4P12644 408 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 EPHA2P29317 976 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 SHC1P29353 583 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 ATXN7L3Q14CW9 347 aaPredicted RBP12.66□□□□□ -0.38
BRAT1-203ENST00000467558 FCRL6Q6DN72 434 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 NDUFAF7Q7L592 441 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 VN1R4Q7Z5H5 301 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 ESX1Q8N693 406 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 OR51T1Q8NGJ9 327 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 OR5H2Q8NGV7 314 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 MYEF2Q9P2K5 600 aaKnown RBP12.66□□□□□ -0.38
BRAT1-203ENST00000467558 TTLL8A6PVC2 850 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 NPR2P20594 1047 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 SPOCK1Q08629 439 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 MEP1BQ16820 701 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 C3orf33Q6P1S2 294 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 TMEM53Q6P2H8 277 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 LIX1LQ8IVB5 337 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 LRRC46Q96FV0 321 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 CDCP1Q9H5V8 836 aa12.66□□□□□ -0.38
BRAT1-203ENST00000467558 A0A1B0GVC2 190 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 A6NIN4 97 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 TP53P04637 393 aaPredicted RBP12.65□□□□□ -0.38
BRAT1-203ENST00000467558 ZGLP1P0C6A0 271 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 RPL27P61353 136 aaKnown RBP12.65□□□□□ -0.38
BRAT1-203ENST00000467558 C6orf15Q6UXA7 325 aaPredicted RBP12.65□□□□□ -0.38
BRAT1-203ENST00000467558 FCRLAQ7L513 359 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 SLC16A9Q7RTY1 509 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 PHC2Q8IXK0 858 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 CCDC120Q96HB5 630 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 OR2B2Q9GZK3 357 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 ZNF350Q9GZX5 532 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 NUBP2Q9Y5Y2 271 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 CASP8AP2Q9UKL3 1982 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 P2RX6O15547 441 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 TOXO94900 526 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 GP2P55259 537 aaKnown RBP12.65□□□□□ -0.38
BRAT1-203ENST00000467558 HLA-BQ31612 363 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 RAB11FIP2Q7L804 512 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 POGLUT1Q8NBL1 392 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 VSX1Q9NZR4 365 aaPredicted RBP12.65□□□□□ -0.38
BRAT1-203ENST00000467558 FRG2CA6NGY1 282 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 ZNF736B4DX44 427 aaPredicted RBP12.65□□□□□ -0.38
BRAT1-203ENST00000467558 PRAF2O60831 178 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 LTBQ06643 244 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 GRK1Q15835 563 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 YIF1BQ5BJH7 314 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 PM20D2Q8IYS1 436 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 ASCC1Q8N9N2 400 aaKnown RBP12.65□□□□□ -0.38
BRAT1-203ENST00000467558 ZNF764Q96H86 408 aaPredicted RBP12.65□□□□□ -0.38
BRAT1-203ENST00000467558 HYLS1Q96M11 299 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 GPATCH2Q9NW75 528 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 MAB21L2Q9Y586 359 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 KCNE3Q9Y6H6 103 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 M0R082 166 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 MEN1O00255 615 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 GPR171O14626 319 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 FZD7O75084 574 aa12.65□□□□□ -0.38
BRAT1-203ENST00000467558 RIPPLY1Q0D2K3 151 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms