RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 MRPS30Q9NP92 439 aaKnown RBP3.1□□□□□ -1.91
SMC4-208ENST00000467468 PDP1Q9P0J1 537 aaPredicted RBP3.1□□□□□ -1.91
SMC4-208ENST00000467468 V9GY05 133 aa3.1□□□□□ -1.91
SMC4-208ENST00000467468 CDHR2Q9BYE9 1310 aa3.1□□□□□ -1.91
SMC4-208ENST00000467468 USP47Q96K76 1375 aa3.1□□□□□ -1.91
SMC4-208ENST00000467468 A0A1W2PQ72 361 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 GOLGA8TH3BQL2 631 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 BOLA2-SMG1P6H3BVE0 249 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 CCL21O00585 134 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 CHST1O43916 411 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 SOX15O60248 233 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 SERF1AO75920 110 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 TSPAN13O95857 204 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 IGHV3-48P01763 117 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 IGHV3-23P01764 117 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 IGHV2-5P01817 119 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 KLK3P07288 261 aaPredicted RBP3.09□□□□□ -1.91
SMC4-208ENST00000467468 POLR2MP0CAP2 368 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 CDKN1BP46527 198 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 RPS5P46782 204 aaKnown RBP3.09□□□□□ -1.91
SMC4-208ENST00000467468 OR1G1P47890 313 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 TFPI2P48307 235 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 KLK7P49862 253 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 CCNHP51946 323 aaPredicted RBP3.09□□□□□ -1.91
SMC4-208ENST00000467468 DOC2AQ14183 400 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 GSG1Q2KHT4 349 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 KLHL40Q2TBA0 621 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 C9orf135Q5VTT2 229 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 PAMR1Q6UXH9 720 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 CERS6Q6ZMG9 384 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 MOB1BQ7L9L4 216 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 SLC26A11Q86WA9 606 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 PLA2G4DQ86XP0 818 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 FBXL16Q8N461 479 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 OR52I1Q8NGK6 324 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 OR4A4PQ8NGN8 299 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 GLYATL2Q8WU03 294 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 PIBF1Q8WXW3 757 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 SLC25A38Q96DW6 304 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 ITCHQ96J02 903 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 MS4A4EQ96PG1 132 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 SORT1Q99523 831 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 SH3GL1Q99961 368 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 TMEM59Q9BXS4 323 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 C20orf85Q9H1P6 137 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 ZNF702PQ9H963 129 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 C20orf96Q9NUD7 363 aaPredicted RBP3.09□□□□□ -1.91
SMC4-208ENST00000467468 GPATCH2LQ9NWQ4 482 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 LYARQ9NX58 379 aaKnown RBP3.09□□□□□ -1.91
SMC4-208ENST00000467468 B4GALT7Q9UBV7 327 aa3.09□□□□□ -1.91
SMC4-208ENST00000467468 PEF1Q9UBV8 284 aaKnown RBP3.09□□□□□ -1.91
SMC4-208ENST00000467468 PACSIN2Q9UNF0 486 aaPredicted RBP3.09□□□□□ -1.91
SMC4-208ENST00000467468 IGHV3OR16-13A0A075B7E8 117 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 ARPC4-TTLL3A0A0A6YYG9 625 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 RAB29O14966 203 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 AKR7A2O43488 359 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 ERLIN2O94905 339 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 ATP6V1B2P21281 511 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 CMA1P23946 247 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 STOMP27105 288 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 ATP5C1P36542 298 aaKnown RBP3.08□□□□□ -1.92
SMC4-208ENST00000467468 NAA10P41227 235 aaPredicted RBP3.08□□□□□ -1.92
SMC4-208ENST00000467468 BTDP43251 543 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 MEOX2P50222 304 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 GPX6P59796 221 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 EIF3EP60228 445 aaKnown RBP3.08□□□□□ -1.92
SMC4-208ENST00000467468 ERVK-25P63136 954 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 PAX5Q02548 391 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 LIPEQ05469 1076 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 LY6G6FQ5SQ64 297 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 SLC25A30Q5SVS4 291 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 MARCH8Q5T0T0 291 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 ATAD3CQ5T2N8 411 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 ZNF658Q5TYW1 1059 aaPredicted RBP3.08□□□□□ -1.92
SMC4-208ENST00000467468 TIGD3Q6B0B8 471 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 TRIM40Q6P9F5 258 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 TFAP2EQ6VUC0 442 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 ASCL5Q7RTU5 278 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 SLC16A14Q7RTX9 510 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 C6orf223Q8N319 242 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 ZNF321PQ8N8H1 164 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 OR10G3Q8NGC4 313 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 ZNF564Q8TBZ8 553 aaPredicted RBP3.08□□□□□ -1.92
SMC4-208ENST00000467468 OR1E3Q8WZA6 343 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 NEIL2Q969S2 332 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 C8orf44Q96CB5 159 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 HSFY1Q96LI6 401 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 KCTD14Q9BQ13 255 aaPredicted RBP3.08□□□□□ -1.92
SMC4-208ENST00000467468 ACTR6Q9GZN1 396 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 GBA3Q9H227 469 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 NEUROG2Q9H2A3 272 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 MRPL22Q9NWU5 206 aaKnown RBP3.08□□□□□ -1.92
SMC4-208ENST00000467468 TREM2Q9NZC2 230 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 KIF25Q9UIL4 384 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 UGT2A1Q9Y4X1 527 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 MROH5Q6ZUA9 1318 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 FANCIQ9NVI1 1328 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 GON4LQ3T8J9 2241 aa3.08□□□□□ -1.92
SMC4-208ENST00000467468 IGLV3-22A0A075B6J6 115 aa3.07□□□□□ -1.92
SMC4-208ENST00000467468 TRBV9A0A0B4J1U6 114 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms