RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 SHARPINQ9H0F6 387 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 ZNF281Q9Y2X9 895 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 USP3Q9Y6I4 520 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 TRAV36DV7A0A075B6V5 113 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 MT-ND4P03905 459 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 SNRPD2P62316 118 aaKnown RBP8.08□□□□□ -1.12
HPS4-209ENST00000466781 CXADRP78310 365 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 CEACAM7Q14002 265 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 CREB3L2Q70SY1 520 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 IFI44Q8TCB0 444 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 LHPPQ9H008 270 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 OR51E2Q9H255 320 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 NIPAL2Q9H841 368 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 PADI1Q9ULC6 663 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 TMED7-TICAM2A0A0A6YYA0 188 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 APOA2P02652 100 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 PAX6P26367 422 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 EIF1P41567 113 aaKnown RBP8.08□□□□□ -1.12
HPS4-209ENST00000466781 BIDP55957 195 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 C14orf28Q4W4Y0 310 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 SLC46A3Q7Z3Q1 461 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 NOXA1Q86UR1 476 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 NTMT1Q9BV86 223 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 WWTR1Q9GZV5 400 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 TMED7Q9Y3B3 224 aa8.08□□□□□ -1.12
HPS4-209ENST00000466781 NME4O00746 187 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 SOCS6O14544 535 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 PTTG1O95997 202 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 MGST1P10620 155 aaKnown RBP8.07□□□□□ -1.12
HPS4-209ENST00000466781 BMXP51813 675 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 KCNJ10P78508 379 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 PLA2G7Q13093 441 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 SLC9A3R2Q15599 337 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 LPCAT3Q6P1A2 487 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 IL34Q6ZMJ4 242 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 CATSPERDQ86XM0 798 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 GLB1L2Q8IW92 636 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 B3GNT7Q8NFL0 401 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 GOT1L1Q8NHS2 421 aaPredicted RBP8.07□□□□□ -1.12
HPS4-209ENST00000466781 TFAP2CQ92754 450 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 ATF6BQ99941 703 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 HDAC8Q9BY41 377 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 ZNF696Q9H7X3 374 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 THAP10Q9P2Z0 257 aaPredicted RBP8.07□□□□□ -1.12
HPS4-209ENST00000466781 ADAM29Q9UKF5 820 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 CDK5RAP2Q96SN8 1893 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 AGAP14A8MT82 685 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 AIPO00170 330 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 TRAF3IP2O43734 574 aaPredicted RBP8.07□□□□□ -1.12
HPS4-209ENST00000466781 HPGDSO60760 199 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 CLDN1O95832 211 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 GRPP07492 148 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 CDK4P11802 303 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 HLA-DOBP13765 273 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 CCR7P32248 378 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 EDDM3AQ14507 147 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 ZNF74Q16587 644 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 B3GLCTQ6Y288 498 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 SECTM1Q8WVN6 248 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 EMG1Q92979 244 aaKnown RBP8.07□□□□□ -1.12
HPS4-209ENST00000466781 INTS12Q96CB8 462 aaKnown RBP8.07□□□□□ -1.12
HPS4-209ENST00000466781 LCORQ96JN0 433 aaPredicted RBP8.07□□□□□ -1.12
HPS4-209ENST00000466781 COQ10AQ96MF6 247 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 GSTO2Q9H4Y5 243 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 LUZP4Q9P127 313 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 MMACHCQ9Y4U1 282 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 TMEM221A6NGB7 291 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 SERINC4A6NH21 518 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 TMEM212A6NML5 194 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 HSD17B6O14756 317 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 HLA-AP01891 365 aaKnown RBP8.07□□□□□ -1.12
HPS4-209ENST00000466781 NDUFB7P17568 137 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 HLA-FP30511 346 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 ETV4P43268 484 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 TGM4P49221 684 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 HBG1P69891 147 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 HBG2P69892 147 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 MFAP5Q13361 173 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 FAM74A1Q5RGS3 127 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 GDPGP1Q6ZNW5 385 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 OR7G1Q8NGA0 311 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 OR8J2Q8NGG1 315 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 ADAMTS14Q8WXS8 1223 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 CPPED1Q9BRF8 314 aaPredicted RBP8.07□□□□□ -1.12
HPS4-209ENST00000466781 IER2Q9BTL4 223 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 TMEM43Q9BTV4 400 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 MFFQ9GZY8 342 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 MOKQ9UQ07 419 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 MRPS28Q9Y2Q9 187 aaKnown RBP8.07□□□□□ -1.12
HPS4-209ENST00000466781 PCDHGA7Q9Y5G6 932 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 F6UZH7 168 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 UBBP0CG47 229 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 OR1D5P58170 312 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 RPS27AP62979 156 aaKnown RBP8.07□□□□□ -1.12
HPS4-209ENST00000466781 UBA52P62987 128 aaKnown RBP8.07□□□□□ -1.12
HPS4-209ENST00000466781 ZNF77Q15935 545 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 PAPD4Q6PIY7 484 aaKnown RBP8.07□□□□□ -1.12
HPS4-209ENST00000466781 OGFOD3Q6PK18 319 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 CD300LGQ6UXG3 332 aa8.07□□□□□ -1.12
HPS4-209ENST00000466781 RANBP10Q6VN20 620 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms