RNA–Protein interactions for RNA: ENST00000466342.1

SQSTM1-206, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 808 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-206ENST00000466342 IGHV3-15A0A0B4J1V0 119 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 LIPT2A6NK58 231 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 EIF1BO60739 113 aaKnown RBP10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 CYTIPO60759 359 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 SS18L1O75177 396 aaPredicted RBP10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 THRBP10828 461 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 LOXP28300 417 aaPredicted RBP10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 IFNA8P32881 189 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 RPS5P46782 204 aaKnown RBP10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 H3F3AP84243 136 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 MS4A2Q01362 244 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 PIN1Q13526 163 aaPredicted RBP10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 RNPS1Q15287 305 aaKnown RBP10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 OR7A5Q15622 319 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 ETFDHQ16134 617 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 ABLIM2Q6H8Q1 611 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 PGM2L1Q6PCE3 622 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 CYP2R1Q6VVX0 501 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 WDR88Q6ZMY6 472 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 DHFR2Q86XF0 187 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 MFSD8Q8NHS3 518 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 ABHD3Q8WU67 409 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 PYURFQ96I23 114 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 EPYCQ99645 322 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 PRSS27Q9BQR3 290 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 MED18Q9BUE0 208 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 ZNF426Q9BUY5 554 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 TAPBPLQ9BX59 468 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 GP6Q9HCN6 339 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 FANCFQ9NPI8 374 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 KLHL9Q9P2J3 617 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 RIMS3Q9UJD0 308 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 V9GYQ6 96 aa10.53□□□□□ -0.72
SQSTM1-206ENST00000466342 TRAV36DV7A0A075B6V5 113 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 TCRBV5S2A0A599 114 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 FTCDNL1E5RQL4 147 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 J3KTA2 159 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 GSC2O15499 205 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 OR2T1O43869 369 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 FZD7O75084 574 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 STAMBPO95630 424 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 SEMG1P04279 462 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 PPP3CBP16298 524 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 PTNP21246 168 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 YAP1P46937 504 aaKnown RBP10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 ST3GAL3Q11203 375 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 TRAP1Q12931 704 aaKnown RBP10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 FAM69AQ5T7M9 428 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 TTC33Q6PID6 262 aaPredicted RBP10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 PAQR6Q6TCH4 344 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 BEND4Q6ZU67 534 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 TSEN54Q7Z6J9 526 aaKnown RBP10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 OFCC1Q8IZS5 231 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 OR6S1Q8NH40 331 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 PIGXQ8TBF5 258 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 POP5Q969H6 163 aaKnown RBP10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 TAAR8Q969N4 342 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 MCUR1Q96AQ8 359 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 C7orf34Q96L11 122 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 PSD2Q9BQI7 771 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 NAA11Q9BSU3 229 aaPredicted RBP10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 CADM1Q9BY67 442 aaKnown RBP10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 SLC19A3Q9BZV2 496 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 LRMDAQ9H2I8 198 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 BCO1Q9HAY6 547 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 TMEM160Q9NX00 188 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 KLHL13Q9P2N7 655 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 CLEC4AQ9UMR7 237 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 ENPP4Q9Y6X5 453 aa10.52□□□□□ -0.73
SQSTM1-206ENST00000466342 ZNF814B7Z6K7 855 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 EBAG9O00559 213 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 ACOT8O14734 319 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 FFAR1O14842 300 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 PRSS23O95084 383 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 AKR7A3O95154 331 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 GTF2E2P29084 291 aaKnown RBP10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 AGTR1P30556 359 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 RBM34P42696 430 aaKnown RBP10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 VLDLRP98155 873 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 SRSF2Q01130 221 aaKnown RBP10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 RASGEF1BQ0VAM2 473 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 PDK3Q15120 406 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 OTUD3Q5T2D3 398 aaPredicted RBP10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 C6orf52Q5T4I8 152 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 CCDC121Q6ZUS5 278 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 STK32CQ86UX6 486 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 CYP4Z1Q86W10 505 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 NKAIN4Q8IVV8 208 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 TMEM99Q8N816 258 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 LRGUKQ96M69 825 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 ZNF300Q96RE9 604 aaPredicted RBP10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 TACO1Q9BSH4 297 aaKnown RBP10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 FNDC11Q9BVV2 318 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 KLHL4Q9C0H6 718 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 OR10A4Q9H209 315 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 MMADHCQ9H3L0 296 aaPredicted RBP10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 NDUFAF4Q9P032 175 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 RHCGQ9UBD6 479 aa10.51□□□□□ -0.73
SQSTM1-206ENST00000466342 LPAR3Q9UBY5 353 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms