RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 LEF1Q9UJU2 399 aaPredicted RBP4.92□□□□□ -1.62
NCL-208ENST00000466274 NFU1Q9UMS0 254 aa4.92□□□□□ -1.62
NCL-208ENST00000466274 SLC9A8Q9Y2E8 581 aa4.92□□□□□ -1.62
NCL-208ENST00000466274 PLCE1Q9P212 2302 aa4.92□□□□□ -1.62
NCL-208ENST00000466274 TENM2Q9NT68 2774 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 ARPC4-TTLL3A0A0A6YYG9 625 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 IGHV1-69-2A0A0G2JMI3 117 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 A0A1W2PPW3 197 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 TCRBV7S3A2A0A539 114 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 POC1B-GALNT4F8VUJ3 575 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 H3BNH8 94 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 K7EPI3 171 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 SULT2B1O00204 365 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 TPD52L2O43399 206 aaKnown RBP4.91□□□□□ -1.62
NCL-208ENST00000466274 OXSR1O95747 527 aaPredicted RBP4.91□□□□□ -1.62
NCL-208ENST00000466274 IGLV1-44P01699 117 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 IGHMP01871 453 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 IGFBP1P08833 259 aaPredicted RBP4.91□□□□□ -1.62
NCL-208ENST00000466274 LYL1P12980 280 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 ZNF12P17014 697 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 PGAM1P18669 254 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 EPORP19235 508 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 GABRA3P34903 492 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 CRYBB2P43320 205 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 ALDH3B1P43353 468 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 PTDSS1P48651 473 aaKnown RBP4.91□□□□□ -1.62
NCL-208ENST00000466274 DIO1P49895 249 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 ZNF81P51508 661 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 SLC16A1P53985 500 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 SLC12A2P55011 1212 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 FOXG1P55316 489 aaPredicted RBP4.91□□□□□ -1.62
NCL-208ENST00000466274 EMX1Q04741 257 aaPredicted RBP4.91□□□□□ -1.62
NCL-208ENST00000466274 SNTB2Q13425 540 aaKnown RBP4.91□□□□□ -1.62
NCL-208ENST00000466274 DEFB112Q30KQ8 113 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 TBRG1Q3YBR2 411 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 FBXO48Q5FWF7 155 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 ABLIM2Q6H8Q1 611 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 BTNL3Q6UXE8 466 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 LRRN1Q6UXK5 716 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 APOOLQ6UXV4 268 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 GDPGP1Q6ZNW5 385 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 TMPPEQ6ZT21 453 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 MTERF4Q7Z6M4 381 aaKnown RBP4.91□□□□□ -1.62
NCL-208ENST00000466274 SYCE1Q8N0S2 351 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 GALNT4Q8N4A0 578 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 LRRC57Q8N9N7 239 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 GATSQ8NAP1 163 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 MAGEE2Q8TD90 523 aaPredicted RBP4.91□□□□□ -1.62
NCL-208ENST00000466274 LRRC39Q96DD0 335 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 CHIAQ9BZP6 476 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 C16orf95Q9H693 158 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 DENND2DQ9H6A0 471 aaPredicted RBP4.91□□□□□ -1.62
NCL-208ENST00000466274 MARCH7Q9H992 704 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 ANKRA2Q9H9E1 313 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 POPDC3Q9HBV1 291 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 UBQLN4Q9NRR5 601 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 SIRT3Q9NTG7 399 aaPredicted RBP4.91□□□□□ -1.62
NCL-208ENST00000466274 DECR2Q9NUI1 292 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 C14orf119Q9NWQ9 140 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 UBAP1Q9NZ09 502 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 VSX1Q9NZR4 365 aaPredicted RBP4.91□□□□□ -1.62
NCL-208ENST00000466274 OR5V1Q9UGF6 321 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 WIPI2Q9Y4P8 454 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 INSIG2Q9Y5U4 225 aa4.91□□□□□ -1.62
NCL-208ENST00000466274 A0A087WV62 115 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 A0A096LPK6 155 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 IGHV2OR16-5A0A0B4J2B6 119 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 A0A1W2PQD3 144 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 ISPDA4D126 451 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 ZNF587BE7ETH6 402 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 DNPH1O43598 174 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 TRAF3IP2O43734 574 aaPredicted RBP4.9□□□□□ -1.63
NCL-208ENST00000466274 EFNA2O43921 213 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 NME6O75414 186 aaPredicted RBP4.9□□□□□ -1.63
NCL-208ENST00000466274 HSPA4LO95757 839 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 IGKV3-15P01624 115 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 MT-ND5P03915 603 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 OSMP13725 252 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 CBR1P16152 277 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 DDCP20711 480 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 FKBP2P26885 142 aaKnown RBP4.9□□□□□ -1.63
NCL-208ENST00000466274 ARR3P36575 388 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 MAGEA6P43360 314 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 PRIM2P49643 509 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 P2RX1P51575 399 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 TERF1P54274 439 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 ATP6V0D1P61421 351 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 CRYMQ14894 314 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 MOGQ16653 247 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 GKAP1Q5VSY0 366 aaPredicted RBP4.9□□□□□ -1.63
NCL-208ENST00000466274 KRT80Q6KB66 452 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 PGBD2Q6P3X8 592 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 C11orf88Q6PI97 169 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 CCDC36Q8IYA8 594 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 ZSCAN4Q8NAM6 433 aaPredicted RBP4.9□□□□□ -1.63
NCL-208ENST00000466274 ZNF527Q8NB42 609 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 OR4F17Q8NGA8 305 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 OR4C3Q8NH37 302 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 DPF1Q92782 380 aa4.9□□□□□ -1.63
NCL-208ENST00000466274 OR4F4Q96R69 305 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms