RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 MED17Q9NVC6 651 aa4.94□□□□□ -1.62
VPS41-211ENST00000466017 PLA2G3Q9NZ20 509 aa4.94□□□□□ -1.62
VPS41-211ENST00000466017 KLRF1Q9NZS2 232 aa4.94□□□□□ -1.62
VPS41-211ENST00000466017 MED11Q9P086 117 aa4.94□□□□□ -1.62
VPS41-211ENST00000466017 KIF17Q9P2E2 1029 aa4.94□□□□□ -1.62
VPS41-211ENST00000466017 BOKQ9UMX3 212 aaPredicted RBP4.94□□□□□ -1.62
VPS41-211ENST00000466017 EDARQ9UNE0 448 aa4.94□□□□□ -1.62
VPS41-211ENST00000466017 BAIAP2Q9UQB8 552 aa4.94□□□□□ -1.62
VPS41-211ENST00000466017 SIGLEC7Q9Y286 467 aa4.94□□□□□ -1.62
VPS41-211ENST00000466017 TRAPPC4Q9Y296 219 aa4.94□□□□□ -1.62
VPS41-211ENST00000466017 KLF13Q9Y2Y9 288 aaPredicted RBP4.94□□□□□ -1.62
VPS41-211ENST00000466017 SPIN1Q9Y657 262 aaPredicted RBP4.94□□□□□ -1.62
VPS41-211ENST00000466017 ZFHX2Q9C0A1 2572 aaPredicted RBP4.93□□□□□ -1.62
VPS41-211ENST00000466017 TRAV36DV7A0A075B6V5 113 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 TMED7-TICAM2A0A0A6YYA0 188 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 A0A0A6YYJ9 748 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 MAGEA13PA6NCF6 341 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 UNC119BA6NIH7 251 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 ARGFXA6NJG6 315 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 NPIPB13A6NJU9 1138 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 B4DXG7 233 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 NPIPB4C9JG80 1138 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 KLRC4-KLRK1H3BQV0 150 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 K7ENP7 123 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 KLK10O43240 276 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 DNPH1O43598 174 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 SCO2O43819 266 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 ZIC3O60481 467 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 HCN1O60741 890 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 OR7A10O76100 309 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 WDPCPO95876 746 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 ASAH2BP0C7U1 165 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 IFI30P13284 250 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 GABRB1P18505 474 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 CHMP24386 653 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 GGT2P36268 569 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 POLR2IP36954 125 aaKnown RBP4.93□□□□□ -1.62
VPS41-211ENST00000466017 PLA2G5P39877 138 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 MEOX1P50221 254 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 ZNF41P51814 821 aaPredicted RBP4.93□□□□□ -1.62
VPS41-211ENST00000466017 SMSP52788 366 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 NUP107P57740 925 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 SNRPGP62308 76 aaKnown RBP4.93□□□□□ -1.62
VPS41-211ENST00000466017 RPS4XP62701 263 aaKnown RBP4.93□□□□□ -1.62
VPS41-211ENST00000466017 OC90Q02509 493 aaPredicted RBP4.93□□□□□ -1.62
VPS41-211ENST00000466017 LTBQ06643 244 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 TMED1Q13445 227 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 FHL1Q13642 323 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 TOMM34Q15785 309 aaPredicted RBP4.93□□□□□ -1.62
VPS41-211ENST00000466017 BCL2A1Q16548 175 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 ZNF74Q16587 644 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 NDUFAF6Q330K2 333 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 ZBED5Q49AG3 693 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 RBM48Q5RL73 367 aaKnown RBP4.93□□□□□ -1.62
VPS41-211ENST00000466017 FAM69AQ5T7M9 428 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 BROXQ5VW32 411 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 FCRLBQ6BAA4 426 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 INO80CQ6PI98 192 aaPredicted RBP4.93□□□□□ -1.62
VPS41-211ENST00000466017 UGT2A3Q6UWM9 527 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 ZNF620Q6ZNG0 422 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 SLC46A3Q7Z3Q1 461 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 MDGA2Q7Z553 956 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 VASH2Q86V25 355 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 NRMQ8IXM6 262 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 CPAMD8Q8IZJ3 1885 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 C8orf59Q8N0T1 100 aaPredicted RBP4.93□□□□□ -1.62
VPS41-211ENST00000466017 CADM2Q8N3J6 435 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 GTPBP8Q8N3Z3 284 aaPredicted RBP4.93□□□□□ -1.62
VPS41-211ENST00000466017 LRRC75AQ8NAA5 344 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 GATSQ8NAP1 163 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 ZFP62Q8NB50 900 aaPredicted RBP4.93□□□□□ -1.62
VPS41-211ENST00000466017 TMEM178AQ8NBL3 297 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 ADPRHL1Q8NDY3 354 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 FDCSPQ8NFU4 85 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 OR2M7Q8NG81 312 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 OR4K17Q8NGC6 315 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 OR8J1Q8NGP2 316 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 POC1BQ8TC44 478 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 TM9SF4Q92544 642 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 ZNF566Q969W8 418 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 ZNF524Q96C55 264 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 DDIT4LQ96D03 193 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 BPIFA2Q96DR5 249 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 FAM122AQ96E09 287 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 SGTBQ96EQ0 304 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 SH3YL1Q96HL8 342 aaPredicted RBP4.93□□□□□ -1.62
VPS41-211ENST00000466017 MUS81Q96NY9 551 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 SNX18Q96RF0 628 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 GPX7Q96SL4 187 aaPredicted RBP4.93□□□□□ -1.62
VPS41-211ENST00000466017 TEX12Q9BXU0 123 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 POLDIP3Q9BY77 421 aaKnown RBP4.93□□□□□ -1.62
VPS41-211ENST00000466017 PRRG3Q9BZD7 231 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 OR2B2Q9GZK3 357 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 FN3KQ9H479 309 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 GALNT9Q9HCQ5 603 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 EMC7Q9NPA0 242 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 ACKR4Q9NPB9 350 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 CTPS2Q9NRF8 586 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 PNPLA3Q9NST1 481 aa4.93□□□□□ -1.62
VPS41-211ENST00000466017 C20orf141Q9NUB4 165 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms