RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 ENPP6Q6UWR7 440 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 ZNF836Q6ZNA1 936 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 LRRC74BQ6ZQY2 392 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 MTERF4Q7Z6M4 381 aaKnown RBP4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 GRAMD2AQ8IUY3 354 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 KIRREL3Q8IZU9 778 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 EID3Q8N140 333 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 ZNF619Q8N2I2 560 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 CLIP4Q8N3C7 705 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 TMCO5AQ8N6Q1 288 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 VPS37AQ8NEZ2 397 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 OR5W2Q8NH69 310 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 OR2V1Q8NHB1 315 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 ROBO4Q8WZ75 1007 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 SPDL1Q96EA4 605 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 TMEM19Q96HH6 336 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 ITCHQ96J02 903 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 ARL5BQ96KC2 179 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 LURAP1Q96LR2 239 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 TRNT1Q96Q11 434 aaKnown RBP4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 ZBTB18Q99592 522 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 SLC39A3Q9BRY0 314 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 CCDC106Q9BWC9 280 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 TMEM120AQ9BXJ8 343 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 OR11A1Q9GZK7 315 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 LAT2Q9GZY6 243 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 HOXD1Q9GZZ0 328 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 RNF122Q9H9V4 155 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 CTPS2Q9NRF8 586 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 SERTAD4Q9NUC0 356 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 EXD2Q9NVH0 621 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 ZNF629Q9UEG4 869 aaPredicted RBP4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 PCDHGB4Q9UN71 923 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 USP22Q9UPT9 525 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 AP4B1Q9Y6B7 739 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 ZANQ9Y493 2812 aa4.26□□□□□ -1.73
EXOSC3-204ENST00000465860 FLNAP21333 2647 aaKnown RBP4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 ACANP16112 2415 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 CADP27708 2225 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 F8P00451 2351 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 A0A096LPI6 279 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 TMEM72A0PK05 275 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 A8MXE2 369 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 SMAD9O15198 467 aaKnown RBP4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 TPST1O60507 370 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 EIF4E2O60573 245 aaKnown RBP4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 TPST2O60704 377 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 ANP32DO95626 131 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 AK1P00568 194 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 GUSBP08236 651 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 KRT16P08779 473 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 NR2F1P10589 423 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 CCNA2P20248 432 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 PTNP21246 168 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 OPRM1P35372 400 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 PRRC2AP48634 2157 aaKnown RBP4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 IDH2P48735 452 aaKnown RBP4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 GZMMP51124 257 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 ATP4BP51164 291 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 CRYBA2P53672 197 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 DSTNP60981 165 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 EEF1A1P68104 462 aaKnown RBP4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 SSBP2P81877 361 aaPredicted RBP4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 MERTKQ12866 999 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 EPS8Q12929 822 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 BNIP2Q12982 314 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 CBFBQ13951 182 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 CAPRIN1Q14444 709 aaKnown RBP4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 SQLEQ14534 574 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 TSC22D1Q15714 1073 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 ZNF239Q16600 458 aaKnown RBP4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 FBXL19-AS1Q494R0 122 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 RUNDC3AQ59EK9 446 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 ATAD3BQ5T9A4 648 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 HBMQ6B0K9 141 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 SUMO4Q6EEV6 95 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 PPP4R4Q6NUP7 873 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 BHLHB9Q6PI77 547 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 MSANTD1Q6ZTZ1 278 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 PLEKHM3Q6ZWE6 761 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 EIF3MQ7L2H7 374 aaKnown RBP4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 NUFIP2Q7Z417 695 aaKnown RBP4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 PTOV1Q86YD1 416 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 FAM90A1Q86YD7 464 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 MISPQ8IVT2 679 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 TRIML2Q8N7C3 387 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 CNEP1R1Q8N9A8 125 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 NFKBIDQ8NI38 313 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 ABHD3Q8WU67 409 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 C10orf82Q8WW14 230 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 OSTF1Q92882 214 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 RNASE6Q93091 150 aaKnown RBP4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 KLHL15Q96M94 604 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 ZNF317Q96PQ6 595 aaPredicted RBP4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 GPATCH1Q9BRR8 931 aaKnown RBP4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 SFXN3Q9BWM7 321 aa4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 RBM24Q9BX46 236 aaKnown RBP4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 MTHFD2LQ9H903 347 aaPredicted RBP4.25□□□□□ -1.73
EXOSC3-204ENST00000465860 POLE3Q9NRF9 147 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms