RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 LEF1Q9UJU2 399 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-214ENST00000465269 PCDHGB4Q9UN71 923 aa12.71□□□□□ -0.37
HDAC6-214ENST00000465269 NOTCH3Q9UM47 2321 aa12.71□□□□□ -0.38
HDAC6-214ENST00000465269 EPPK1P58107 5090 aaKnown RBP12.7□□□□□ -0.38
HDAC6-214ENST00000465269 STX11O75558 287 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 CRCPO75575 148 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 IGHV4-38-2P0DP08 117 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 ZNF35P13682 527 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 CPA3P15088 417 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 ATP5F1P24539 256 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-214ENST00000465269 SOAT1P35610 550 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 RAG2P55895 527 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 NKPD1Q17RQ9 610 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 CEACAM16Q2WEN9 425 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 GKAP1Q5VSY0 366 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-214ENST00000465269 REP15Q6BDI9 236 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 TMEM225Q6GV28 225 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 C16orf87Q6PH81 154 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 ZYG11AQ6WRX3 759 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 ANKRD42Q8N9B4 389 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 GLB1L3Q8NCI6 653 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-214ENST00000465269 L3HYPDHQ96EM0 354 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 FCRL1Q96LA6 429 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 GPA33Q99795 319 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 GAL3ST1Q99999 423 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 SF3B5Q9BWJ5 86 aaKnown RBP12.7□□□□□ -0.38
HDAC6-214ENST00000465269 GPR35Q9HC97 309 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 SSU72Q9NP77 194 aaKnown RBP12.7□□□□□ -0.38
HDAC6-214ENST00000465269 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.7□□□□□ -0.38
HDAC6-214ENST00000465269 TAAR3PQ9P1P4 343 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 STK38LQ9Y2H1 464 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 FIS1Q9Y3D6 152 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 NOX1Q9Y5S8 564 aa12.7□□□□□ -0.38
HDAC6-214ENST00000465269 TRAPPC2LH3BP13 241 aa12.69□□□□□ -0.38
HDAC6-214ENST00000465269 CLDN34H7C241 214 aa12.69□□□□□ -0.38
HDAC6-214ENST00000465269 SCAMP2O15127 329 aaKnown RBP12.69□□□□□ -0.38
HDAC6-214ENST00000465269 CD79AP11912 226 aa12.69□□□□□ -0.38
HDAC6-214ENST00000465269 GATA3P23771 443 aa12.69□□□□□ -0.38
HDAC6-214ENST00000465269 GLRXP35754 106 aa12.69□□□□□ -0.38
HDAC6-214ENST00000465269 POLR2HP52434 150 aaKnown RBP12.69□□□□□ -0.38
HDAC6-214ENST00000465269 BEAN1Q3B7T3 259 aa12.69□□□□□ -0.38
HDAC6-214ENST00000465269 SAXO2Q658L1 398 aa12.69□□□□□ -0.38
HDAC6-214ENST00000465269 OLFML2AQ68BL7 652 aa12.69□□□□□ -0.38
HDAC6-214ENST00000465269 USP51Q70EK9 711 aa12.69□□□□□ -0.38
HDAC6-214ENST00000465269 ZNF317Q96PQ6 595 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-214ENST00000465269 MECRQ9BV79 373 aa12.69□□□□□ -0.38
HDAC6-214ENST00000465269 MS4A7Q9GZW8 240 aaPredicted RBP12.69□□□□□ -0.38
HDAC6-214ENST00000465269 ZNF350Q9GZX5 532 aa12.69□□□□□ -0.38
HDAC6-214ENST00000465269 OR51B6Q9H340 312 aa12.69□□□□□ -0.38
HDAC6-214ENST00000465269 IGHV1-69-2A0A0G2JMI3 117 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 TMEM120BA0PK00 339 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 ISPDA4D126 451 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 WDR91A4D1P6 747 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 C17orf100A8MU93 164 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 ZNF208O43345 1280 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 HOXA3O43365 443 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-214ENST00000465269 ZNF432O94892 652 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 KRT16P08779 473 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 HOXB1P14653 301 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-214ENST00000465269 ZNF14P17017 642 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-214ENST00000465269 PAX7P23759 505 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 ALDH3A1P30838 453 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 ATP4BP51164 291 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 CLDN17P56750 224 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 PCLAFQ15004 111 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 FXNQ16595 210 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 TSTQ16762 297 aaKnown RBP12.68□□□□□ -0.38
HDAC6-214ENST00000465269 TRMT5Q32P41 509 aaKnown RBP12.68□□□□□ -0.38
HDAC6-214ENST00000465269 GALNTL6Q49A17 601 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 PHYHD1Q5SRE7 291 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 TYW3Q6IPR3 259 aaKnown RBP12.68□□□□□ -0.38
HDAC6-214ENST00000465269 RETREG3Q86VR2 466 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 SLC22A9Q8IVM8 553 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 C10orf107Q8IVU9 208 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 ARFGAP2Q8N6H7 521 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 MGARPQ8TDB4 240 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 OR5P2Q8WZ92 322 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 POP5Q969H6 163 aaKnown RBP12.68□□□□□ -0.38
HDAC6-214ENST00000465269 ZNF75AQ96N20 296 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 PAIP2Q9BPZ3 127 aaKnown RBP12.68□□□□□ -0.38
HDAC6-214ENST00000465269 ZNF385DQ9H6B1 395 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 BEX1Q9HBH7 125 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 HINT3Q9NQE9 182 aaKnown RBP12.68□□□□□ -0.38
HDAC6-214ENST00000465269 B3GNT2Q9NY97 397 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 SEC14L4Q9UDX3 406 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 PURGQ9UJV8 347 aaKnown RBP12.68□□□□□ -0.38
HDAC6-214ENST00000465269 AUP1Q9Y679 476 aa12.68□□□□□ -0.38
HDAC6-214ENST00000465269 SLC22A31A6NKX4 558 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 HMGB1P1B2RPK0 211 aaPredicted RBP12.67□□□□□ -0.38
HDAC6-214ENST00000465269 CLDN25C9JDP6 229 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 TIMM23O14925 209 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 TM9SF1O15321 606 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 TPD52L2O43399 206 aaKnown RBP12.67□□□□□ -0.38
HDAC6-214ENST00000465269 ATP8B1O43520 1251 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 GPIP06744 558 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 CHRM4P08173 479 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 LINC00032P0C843 101 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 SELEP16581 610 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 MAKP20794 623 aa12.67□□□□□ -0.38
HDAC6-214ENST00000465269 MATN1P21941 496 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms