RNA–Protein interactions for RNA: ENST00000465238.5

COL7A1-205, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-205ENST00000465238 BGLAPP02818 100 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 PPP3CBP16298 524 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 RHCEP18577 417 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 GRPRP30550 384 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 SLC16A1P53985 500 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 VLDLRP98155 873 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 Q5PR19 223 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 PGM2L1Q6PCE3 622 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 C20orf204Q6ZNR8 217 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 H1FNTQ75WM6 255 aaPredicted RBP15.68■□□□□ 0.1
COL7A1-205ENST00000465238 NUFIP2Q7Z417 695 aaKnown RBP15.68■□□□□ 0.1
COL7A1-205ENST00000465238 GALNT5Q7Z7M9 940 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 GPAT4Q86UL3 456 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 STK32CQ86UX6 486 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 TMEM255BQ8WV15 326 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 TMEM239Q8WW34 195 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 ZC3HAV1LQ96H79 300 aaKnown RBP15.68■□□□□ 0.1
COL7A1-205ENST00000465238 SEPHS2Q99611 448 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 SF3B5Q9BWJ5 86 aaKnown RBP15.68■□□□□ 0.1
COL7A1-205ENST00000465238 CADM1Q9BY67 442 aaKnown RBP15.68■□□□□ 0.1
COL7A1-205ENST00000465238 UBTD1Q9HAC8 227 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 FANCFQ9NPI8 374 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 NDUFAF4Q9P032 175 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 RASD1Q9Y272 281 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 B3GALT5Q9Y2C3 310 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 MED31Q9Y3C7 131 aa15.68■□□□□ 0.1
COL7A1-205ENST00000465238 RAI1Q7Z5J4 1906 aaPredicted RBP15.67■□□□□ 0.1
COL7A1-205ENST00000465238 FAM171A2A8MVW0 826 aa15.67■□□□□ 0.1
COL7A1-205ENST00000465238 M0R082 166 aa15.67■□□□□ 0.1
COL7A1-205ENST00000465238 CH25HO95992 272 aa15.67■□□□□ 0.1
COL7A1-205ENST00000465238 MT-ND1P03886 318 aa15.67■□□□□ 0.1
COL7A1-205ENST00000465238 HIST1H2ABP04908 130 aa15.67■□□□□ 0.1
COL7A1-205ENST00000465238 FABP3P05413 133 aa15.67■□□□□ 0.1
COL7A1-205ENST00000465238 NQO1P15559 274 aaKnown RBP15.67■□□□□ 0.1
COL7A1-205ENST00000465238 LTBQ06643 244 aa15.67■□□□□ 0.1
COL7A1-205ENST00000465238 PMS2P3Q13401 168 aa15.67■□□□□ 0.1
COL7A1-205ENST00000465238 SLC17A1Q14916 467 aa15.67■□□□□ 0.1
COL7A1-205ENST00000465238 EXOC3L2Q2M3D2 409 aa15.67■□□□□ 0.1
COL7A1-205ENST00000465238 PRSS57Q6UWY2 283 aa15.67■□□□□ 0.1
COL7A1-205ENST00000465238 HIST3H2AQ7L7L0 130 aa15.67■□□□□ 0.1
COL7A1-205ENST00000465238 TSEN54Q7Z6J9 526 aaKnown RBP15.67■□□□□ 0.1
COL7A1-205ENST00000465238 ZNF100Q8IYN0 542 aa15.67■□□□□ 0.1
COL7A1-205ENST00000465238 ZNF417Q8TAU3 575 aa15.67■□□□□ 0.1
COL7A1-205ENST00000465238 HIST1H2ACQ93077 130 aa15.67■□□□□ 0.1
COL7A1-205ENST00000465238 MOGAT1Q96PD6 335 aa15.67■□□□□ 0.1
COL7A1-205ENST00000465238 ZNF587Q96SQ5 575 aaPredicted RBP15.67■□□□□ 0.1
COL7A1-205ENST00000465238 CCL19Q99731 98 aa15.67■□□□□ 0.1
COL7A1-205ENST00000465238 SMR3AQ99954 134 aa15.67■□□□□ 0.1
COL7A1-205ENST00000465238 NOSIPQ9Y314 301 aaKnown RBP15.67■□□□□ 0.1
COL7A1-205ENST00000465238 FREM1Q5H8C1 2179 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 TCRBV5S2A0A599 114 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 LRRN3E7EW58 273 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 ACOT8O14734 319 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 FZD7O75084 574 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 SEMG1P04279 462 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 H1F0P07305 194 aaKnown RBP15.66■□□□□ 0.1
COL7A1-205ENST00000465238 P2RY4P51582 365 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 UGT2B15P54855 530 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 IL1RL1Q01638 556 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 ZNF74Q16587 644 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 ANKRD34AQ69YU3 496 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 CLEC9AQ6UXN8 241 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 C22orf34Q6ZV56 151 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 RRM2BQ7LG56 351 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 SCAIQ8N9R8 606 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 PIK3C3Q8NEB9 887 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 OR9K2Q8NGE7 335 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 PFN4Q8NHR9 129 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 HS3ST6Q96QI5 342 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 LRMDAQ9H2I8 198 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 MMADHCQ9H3L0 296 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-205ENST00000465238 ANKRD19PQ9H560 264 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 NMNAT1Q9HAN9 279 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-205ENST00000465238 IL1RAPQ9NPH3 570 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 MEPEQ9NQ76 525 aaPredicted RBP15.66■□□□□ 0.1
COL7A1-205ENST00000465238 NANSQ9NR45 359 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 PARPBPQ9NWS1 579 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 SEC14L4Q9UDX3 406 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 TLN2Q9Y4G6 2542 aa15.66■□□□□ 0.1
COL7A1-205ENST00000465238 HTR3EA5X5Y0 456 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 MRPL33O75394 65 aaKnown RBP15.65■□□□□ 0.1
COL7A1-205ENST00000465238 DIRAS1O95057 198 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 PRSS23O95084 383 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 OR6A2O95222 327 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 UMPSP11172 480 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 LOXP28300 417 aaPredicted RBP15.65■□□□□ 0.1
COL7A1-205ENST00000465238 SMIM11AP58511 58 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 CHRNB3Q05901 458 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 C1DQ13901 141 aaKnown RBP15.65■□□□□ 0.1
COL7A1-205ENST00000465238 FLOT2Q14254 428 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 FAM98BQ52LJ0 330 aaKnown RBP15.65■□□□□ 0.1
COL7A1-205ENST00000465238 BEX5Q5H9J7 111 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 STAC2Q6ZMT1 411 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 ZNF730Q6ZMV8 503 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 BEND4Q6ZU67 534 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 ZDHHC21Q8IVQ6 265 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 KDM8Q8N371 416 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 ADPRHL1Q8NDY3 354 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 OR5J2Q8NH18 312 aa15.65■□□□□ 0.1
COL7A1-205ENST00000465238 ACOT11Q8WXI4 607 aaPredicted RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms