RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 ADH5P11766 374 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 PTHLHP12272 177 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 SPI1P17947 270 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 ADRA2CP18825 462 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 MAP3K8P41279 467 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 NANOS3P60323 173 aaKnown RBP6.67□□□□□ -1.34
USP48-206ENST00000464577 SORDQ00796 357 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 MC2RQ01718 297 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 LTBQ06643 244 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 COL9A2Q14055 689 aaPredicted RBP6.67□□□□□ -1.34
USP48-206ENST00000464577 TOMM20Q15388 145 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 RPE65Q16518 533 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 ANKRD16Q6P6B7 361 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 CNKSR3Q6P9H4 555 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 LINC00114Q6XXX2 140 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 DPY19L2P2Q6ZN68 376 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 VN1R4Q7Z5H5 301 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 KCNRGQ8N5I3 272 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 NPEPL1Q8NDH3 523 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 BPIFCQ8NFQ6 507 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 LILRB1Q8NHL6 650 aaPredicted RBP6.67□□□□□ -1.34
USP48-206ENST00000464577 GRHL3Q8TE85 626 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 CCDC107Q8WV48 283 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 SERINC2Q96SA4 455 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 PBX4Q9BYU1 374 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 CCDC86Q9H6F5 360 aaKnown RBP6.67□□□□□ -1.34
USP48-206ENST00000464577 IFT22Q9H7X7 185 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 UPB1Q9UBR1 384 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 IER3IP1Q9Y5U9 82 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 COL4A2P08572 1712 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 ARPC4-TTLL3A0A0A6YYG9 625 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 NPIPA5A0A0B4J1W7 369 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 RAB19A4D1S5 217 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 GGT3PA6NGU5 568 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 PRR19A6NJB7 356 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 C1QTNF3-AMACRE9PGA6 284 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 NPIPA7E9PJI5 369 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 BCL2L11O43521 198 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 KCNJ13O60928 360 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 LDB3O75112 727 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 GLCEO94923 617 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 OR2F2O95006 317 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 ITGB2P05107 769 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 GP1BAP07359 652 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 NGFRP08138 427 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 ZNF888P0CJ79 500 aaPredicted RBP6.67□□□□□ -1.34
USP48-206ENST00000464577 NPIPA8P0DM63 369 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 SLC25A4P12235 298 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 CNR1P21554 472 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 AK4P27144 223 aaPredicted RBP6.67□□□□□ -1.34
USP48-206ENST00000464577 TLX1P31314 330 aaPredicted RBP6.67□□□□□ -1.34
USP48-206ENST00000464577 RORAP35398 523 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 P2RY2P41231 377 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 RPS15AP62244 130 aaKnown RBP6.67□□□□□ -1.34
USP48-206ENST00000464577 DEFA5Q01523 94 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 OC90Q02509 493 aaPredicted RBP6.67□□□□□ -1.34
USP48-206ENST00000464577 OR2F1Q13607 317 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 ALKBH1Q13686 389 aaKnown RBP6.67□□□□□ -1.34
USP48-206ENST00000464577 MELKQ14680 651 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 LPCAT3Q6P1A2 487 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 C11orf88Q6PI97 169 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 FAM220AQ7Z4H9 259 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 C12orf40Q86WS4 652 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 ZNF595Q8IYB9 648 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 RELL2Q8NC24 303 aaPredicted RBP6.67□□□□□ -1.34
USP48-206ENST00000464577 PXYLP1Q8TE99 480 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 NXPE3Q969Y0 559 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 COL26A1Q96A83 441 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 GPX7Q96SL4 187 aaPredicted RBP6.67□□□□□ -1.34
USP48-206ENST00000464577 PIGMQ9H3S5 423 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 SAV1Q9H4B6 383 aaPredicted RBP6.67□□□□□ -1.34
USP48-206ENST00000464577 ADAP2Q9NPF8 381 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 TMEM138Q9NPI0 162 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 SLC17A5Q9NRA2 495 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 STEAP1Q9UHE8 339 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 MRTO4Q9UKD2 239 aaKnown RBP6.67□□□□□ -1.34
USP48-206ENST00000464577 YBX2Q9Y2T7 364 aaKnown RBP6.67□□□□□ -1.34
USP48-206ENST00000464577 UTRNP46939 3433 aa6.67□□□□□ -1.34
USP48-206ENST00000464577 A0A1B0GTI1 187 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 KANTRA0A1W2PQU2 76 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 PCP4L1A6NKN8 68 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 PRR32B1ATL7 298 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 MCIDASD6RGH6 385 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 H7C2Y5 167 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 ADH1CP00326 375 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 TMIGD3P0DMS9 266 aaPredicted RBP6.66□□□□□ -1.34
USP48-206ENST00000464577 SMIM10L1P0DMW3 83 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 ACAA2P42765 397 aaKnown RBP6.66□□□□□ -1.34
USP48-206ENST00000464577 SLC25A1P53007 311 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 STK11Q15831 433 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 HFEQ30201 348 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 TRMT12Q53H54 448 aaKnown RBP6.66□□□□□ -1.34
USP48-206ENST00000464577 ALG10BQ5I7T1 473 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 LY6G6FQ5SQ64 297 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 SLC16A9Q7RTY1 509 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 TMPRSS12Q86WS5 348 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 LSRQ86X29 649 aaPredicted RBP6.66□□□□□ -1.34
USP48-206ENST00000464577 ETFBKMTQ8IXQ9 262 aa6.66□□□□□ -1.34
USP48-206ENST00000464577 C12orf45Q8N5I9 185 aaPredicted RBP6.66□□□□□ -1.34
USP48-206ENST00000464577 OR51L1Q8NGJ5 315 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms