RNA–Protein interactions for RNA: ENST00000463672.1

GGA1-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 3

Gene GGA1, Length 367 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-217ENST00000463672 ARR3P36575 388 aa12.36□□□□□ -0.43
GGA1-217ENST00000463672 PPOXP50336 477 aa12.36□□□□□ -0.43
GGA1-217ENST00000463672 RGS8P57771 180 aaPredicted RBP12.36□□□□□ -0.43
GGA1-217ENST00000463672 IL1RL1Q01638 556 aa12.36□□□□□ -0.43
GGA1-217ENST00000463672 SCARB2Q14108 478 aa12.36□□□□□ -0.43
GGA1-217ENST00000463672 EFNB3Q15768 340 aa12.36□□□□□ -0.43
GGA1-217ENST00000463672 MST1LQ2TV78 715 aa12.36□□□□□ -0.43
GGA1-217ENST00000463672 SWT1Q5T5J6 900 aaKnown RBP12.36□□□□□ -0.43
GGA1-217ENST00000463672 CYB5R2Q6BCY4 276 aa12.36□□□□□ -0.43
GGA1-217ENST00000463672 SLC46A3Q7Z3Q1 461 aa12.36□□□□□ -0.43
GGA1-217ENST00000463672 RANBP3LQ86VV4 465 aaPredicted RBP12.36□□□□□ -0.43
GGA1-217ENST00000463672 MSRB3Q8IXL7 192 aa12.36□□□□□ -0.43
GGA1-217ENST00000463672 SCAIQ8N9R8 606 aa12.36□□□□□ -0.43
GGA1-217ENST00000463672 ZNF417Q8TAU3 575 aa12.36□□□□□ -0.43
GGA1-217ENST00000463672 TAAR8Q969N4 342 aa12.36□□□□□ -0.43
GGA1-217ENST00000463672 ZNF587Q96SQ5 575 aaPredicted RBP12.36□□□□□ -0.43
GGA1-217ENST00000463672 EBF4Q9BQW3 602 aa12.36□□□□□ -0.43
GGA1-217ENST00000463672 NELFAQ9H3P2 528 aa12.36□□□□□ -0.43
GGA1-217ENST00000463672 RABEP2Q9H5N1 569 aa12.36□□□□□ -0.43
GGA1-217ENST00000463672 ZNF442Q9H7R0 627 aa12.36□□□□□ -0.43
GGA1-217ENST00000463672 TMEM27Q9HBJ8 222 aa12.36□□□□□ -0.43
GGA1-217ENST00000463672 GPR35Q9HC97 309 aa12.36□□□□□ -0.43
GGA1-217ENST00000463672 VAPAQ9P0L0 249 aa12.36□□□□□ -0.43
GGA1-217ENST00000463672 KLHL14Q9P2G3 628 aa12.36□□□□□ -0.43
GGA1-217ENST00000463672 SEC14L4Q9UDX3 406 aa12.36□□□□□ -0.43
GGA1-217ENST00000463672 FBN1P35555 2871 aaKnown RBP12.35□□□□□ -0.43
GGA1-217ENST00000463672 IGKV1D-42A0A075B6H8 117 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 A0A087WUJ7 227 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 A0A096LPE4 126 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 TRBV5-3A0A0A0MS03 114 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 A0A0B4J2E0 115 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 A0A1B0GX12 115 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 A0A1W2PPZ6 126 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 LOC390937A0A1W2PQ73 354 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 ZNF99A8MXY4 864 aaPredicted RBP12.35□□□□□ -0.43
GGA1-217ENST00000463672 ERCC1P07992 297 aaPredicted RBP12.35□□□□□ -0.43
GGA1-217ENST00000463672 FAM157CP0CG43 387 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 NQO1P15559 274 aaKnown RBP12.35□□□□□ -0.43
GGA1-217ENST00000463672 CBR1P16152 277 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 GZMKP49863 264 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 AQP5P55064 265 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 LSM11P83369 360 aaKnown RBP eCLIP12.35□□□□□ -0.432e-7■□□□□ 10.2
GGA1-217ENST00000463672 ARF1P84077 181 aaKnown RBP12.35□□□□□ -0.43
GGA1-217ENST00000463672 SQLEQ14534 574 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 ADIPOQQ15848 244 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 PAGE3Q5JUK9 113 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 SNX32Q86XE0 403 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 ARMC8Q8IUR7 673 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 UEVLDQ8IX04 471 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 TMEM123Q8N131 208 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 KDM8Q8N371 416 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 HIPK4Q8NE63 616 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 IL17RDQ8NFM7 739 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 DYDC1Q8WWB3 177 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 STON2Q8WXE9 905 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 NANOS1Q8WY41 292 aaKnown RBP12.35□□□□□ -0.43
GGA1-217ENST00000463672 SLC41A3Q96GZ6 507 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 ANKRD27Q96NW4 1050 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 SORCS2Q96PQ0 1159 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 OR2M2Q96R28 347 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 KCNK17Q96T54 332 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 ASPNQ9BXN1 380 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 PLK3Q9H4B4 646 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 CRLF2Q9HC73 371 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 B3GAT2Q9NPZ5 323 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 SLC52A3Q9NQ40 469 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 SLAMF8Q9P0V8 285 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.35□□□□□ -0.43
GGA1-217ENST00000463672 ANGPT4Q9Y264 503 aa12.35□□□□□ -0.43
GGA1-217ENST00000463672 HEATR1Q9H583 2144 aaKnown RBP12.35□□□□□ -0.43
GGA1-217ENST00000463672 VWC2LB2RUY7 222 aa12.34□□□□□ -0.43
GGA1-217ENST00000463672 TRAF3IP2O43734 574 aaPredicted RBP12.34□□□□□ -0.43
GGA1-217ENST00000463672 OR4A8P0C604 315 aa12.34□□□□□ -0.43
GGA1-217ENST00000463672 ZNF16P17020 682 aaPredicted RBP12.34□□□□□ -0.43
GGA1-217ENST00000463672 TUBA1BP68363 451 aa12.34□□□□□ -0.43
GGA1-217ENST00000463672 TUBA4AP68366 448 aa12.34□□□□□ -0.43
GGA1-217ENST00000463672 CEACAM16Q2WEN9 425 aa12.34□□□□□ -0.43
GGA1-217ENST00000463672 TUBA1AQ71U36 451 aa12.34□□□□□ -0.43
GGA1-217ENST00000463672 ZNF540Q8NDQ6 660 aa12.34□□□□□ -0.43
GGA1-217ENST00000463672 LRR1Q96L50 414 aa12.34□□□□□ -0.43
GGA1-217ENST00000463672 ATP6V1G3Q96LB4 118 aa12.34□□□□□ -0.43
GGA1-217ENST00000463672 VRK1Q99986 396 aaPredicted RBP12.34□□□□□ -0.43
GGA1-217ENST00000463672 TMEM43Q9BTV4 400 aa12.34□□□□□ -0.43
GGA1-217ENST00000463672 RAB1BQ9H0U4 201 aa12.34□□□□□ -0.43
GGA1-217ENST00000463672 SLCO1B3Q9NPD5 702 aa12.34□□□□□ -0.43
GGA1-217ENST00000463672 USP22Q9UPT9 525 aa12.34□□□□□ -0.43
GGA1-217ENST00000463672 NOX1Q9Y5S8 564 aa12.34□□□□□ -0.43
GGA1-217ENST00000463672 ABCA1O95477 2261 aa12.34□□□□□ -0.43
GGA1-217ENST00000463672 CUBNO60494 3623 aa12.33□□□□□ -0.44
GGA1-217ENST00000463672 TPST1O60507 370 aa12.33□□□□□ -0.44
GGA1-217ENST00000463672 FMO6PO60774 539 aa12.33□□□□□ -0.44
GGA1-217ENST00000463672 LY6HO94772 140 aa12.33□□□□□ -0.44
GGA1-217ENST00000463672 MT-ATP6P00846 226 aa12.33□□□□□ -0.44
GGA1-217ENST00000463672 VIMP08670 466 aaKnown RBP12.33□□□□□ -0.44
GGA1-217ENST00000463672 IGHV4-31P0DP07 118 aa12.33□□□□□ -0.44
GGA1-217ENST00000463672 CALCRP30988 508 aa12.33□□□□□ -0.44
GGA1-217ENST00000463672 NR4A2P43354 598 aa12.33□□□□□ -0.44
GGA1-217ENST00000463672 IDH3GP51553 393 aaPredicted RBP12.33□□□□□ -0.44
GGA1-217ENST00000463672 POU3F1Q03052 451 aaPredicted RBP12.33□□□□□ -0.44
GGA1-217ENST00000463672 PUDPQ08623 228 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms