RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 PLPP2O43688 288 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 DKK1O94907 266 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 GLCEO94923 617 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 GP1BAP07359 652 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 OR2T7P0C7T2 308 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 COX6A1P12074 109 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 AHCYP23526 432 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 RPS27P42677 84 aaKnown RBP11.58□□□□□ -0.56
VAPB-203ENST00000463370 MADCAM1Q13477 382 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.58□□□□□ -0.564e-6■■□□□ 13.8
VAPB-203ENST00000463370 TUBA3EQ6PEY2 450 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 MISPQ8IVT2 679 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 OR2T27Q8NH04 317 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 SLC30A2Q9BRI3 323 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 DEFB126Q9BYW3 111 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 SYT4Q9H2B2 425 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 FAIMQ9NVQ4 179 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 CRNNQ9UBG3 495 aaPredicted RBP11.58□□□□□ -0.56
VAPB-203ENST00000463370 KLHDC2Q9Y2U9 406 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 PCDHGB6Q9Y5F9 930 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 NOX1Q9Y5S8 564 aa11.58□□□□□ -0.56
VAPB-203ENST00000463370 A0A087WV48 116 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 TVP23AA6NH52 213 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 RGS9O75916 674 aaPredicted RBP11.57□□□□□ -0.56
VAPB-203ENST00000463370 HLA-DOBP13765 273 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 TGM1P22735 817 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 PSMB10P40306 273 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 ZNF45Q02386 682 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 RUNX1T1Q06455 604 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 LGALS3BPQ08380 585 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 FOXF1Q12946 379 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 GPR50Q13585 617 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 SLC35D3Q5M8T2 416 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 SPANXN2Q5MJ10 180 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 LCN1P1Q5VSP4 162 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 DMKNQ6E0U4 476 aaPredicted RBP11.57□□□□□ -0.56
VAPB-203ENST00000463370 GPALPP1Q8IXQ4 340 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 PM20D2Q8IYS1 436 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 ZNF417Q8TAU3 575 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 ZNF587Q96SQ5 575 aaPredicted RBP11.57□□□□□ -0.56
VAPB-203ENST00000463370 RNF32Q9H0A6 362 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 C14orf119Q9NWQ9 140 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 NCDNQ9UBB6 729 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 SLC6A5Q9Y345 797 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 A0A1W2PRG6 482 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 FTCDNL1E5RQL4 147 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 ARHGEF9O43307 516 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 EFNA2O43921 213 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 FBXO45P0C2W1 286 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 PSKH1P11801 424 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 AVPR2P30518 371 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 SLC25A1P53007 311 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 RPS18P62269 152 aaKnown RBP11.57□□□□□ -0.56
VAPB-203ENST00000463370 C19orf57Q0VDD7 668 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 ACKR1Q16570 336 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 SGCBQ16585 318 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 TRIM16LQ309B1 348 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 CDONQ4KMG0 1287 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 MAMDC2Q7Z304 686 aaPredicted RBP11.57□□□□□ -0.56
VAPB-203ENST00000463370 WDFY1Q8IWB7 410 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 GHSRQ92847 366 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 CEP19Q96LK0 163 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 IMMP1LQ96LU5 166 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 FOXN4Q96NZ1 517 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 GNG8Q9UK08 70 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 FBXL2Q9UKC9 423 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 NXT1Q9UKK6 140 aaKnown RBP11.57□□□□□ -0.56
VAPB-203ENST00000463370 ALPK2Q86TB3 2170 aa11.57□□□□□ -0.56
VAPB-203ENST00000463370 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 PFDN1O60925 122 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 ITGA10O75578 1167 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 SNX4O95219 450 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 NAGAP17050 411 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 CALRP27797 417 aaKnown RBP11.56□□□□□ -0.56
VAPB-203ENST00000463370 SHC1P29353 583 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 IL10RAQ13651 578 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 SF3A2Q15428 464 aaKnown RBP11.56□□□□□ -0.56
VAPB-203ENST00000463370 ZNF79Q15937 498 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 KIF26BQ2KJY2 2108 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 PLA2G2CQ5R387 149 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 PRAMEF20Q5VT98 475 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 SLC22A16Q86VW1 577 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 OR5M1Q8NGP8 315 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 ABHD4Q8TB40 342 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 SNX33Q8WV41 574 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 SNRNP27Q8WVK2 155 aaKnown RBP11.56□□□□□ -0.56
VAPB-203ENST00000463370 TTC9Q92623 222 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 RNF166Q96A37 237 aaPredicted RBP11.56□□□□□ -0.56
VAPB-203ENST00000463370 SMAD5Q99717 465 aaKnown RBP11.56□□□□□ -0.56
VAPB-203ENST00000463370 COQ7Q99807 217 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 METTL7AQ9H8H3 244 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 WDR76Q9H967 626 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 RHBDL2Q9NX52 303 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 POLHQ9Y253 713 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 CMAHPQ9Y471 501 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 C9J4A7 227 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 PLPP3O14495 311 aa11.56□□□□□ -0.56
VAPB-203ENST00000463370 CDX4O14627 284 aaPredicted RBP11.56□□□□□ -0.56
VAPB-203ENST00000463370 DXOO77932 396 aaKnown RBP11.56□□□□□ -0.56
VAPB-203ENST00000463370 MT-ATP6P00846 226 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms