RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 CLOCKO15516 846 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 HNRNPRO43390 633 aaKnown RBP10.46□□□□□ -0.73
CPNE1-221ENST00000462352 KLF4O43474 513 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 RNF13O43567 381 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 TRAF3IP2O43734 574 aaPredicted RBP10.46□□□□□ -0.73
CPNE1-221ENST00000462352 MRPL33O75394 65 aaKnown RBP10.46□□□□□ -0.73
CPNE1-221ENST00000462352 SERPINI2O75830 405 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 CCNB2O95067 398 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 TSPAN19P0C672 248 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 HLA-DOBP13765 273 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 EDNRAP25101 427 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 UQCRC1P31930 480 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 NTF4P34130 210 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 IFNGR2P38484 337 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 AQP2P41181 271 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 SLC9A3P48764 834 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 ASCL1P50553 236 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 IST1P53990 364 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 RPS4XP62701 263 aaKnown RBP10.46□□□□□ -0.73
CPNE1-221ENST00000462352 POU3F1Q03052 451 aaPredicted RBP10.46□□□□□ -0.73
CPNE1-221ENST00000462352 RPL18Q07020 188 aaKnown RBP10.46□□□□□ -0.73
CPNE1-221ENST00000462352 FHL1Q13642 323 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 C1DQ13901 141 aaKnown RBP10.46□□□□□ -0.73
CPNE1-221ENST00000462352 GK3PQ14409 553 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 PGBD2Q6P3X8 592 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 TFAP2EQ6VUC0 442 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.46□□□□□ -0.73
CPNE1-221ENST00000462352 PXKQ7Z7A4 578 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 OAFQ86UD1 273 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 UEVLDQ8IX04 471 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 LINC00471Q8N535 108 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 ZNF610Q8N9Z0 462 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 OR9Q2Q8NGE9 314 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 PYDC1Q8WXC3 89 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 TMEM45BQ96B21 275 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 GPA33Q99795 319 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 HIF3AQ9Y2N7 669 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 NOX1Q9Y5S8 564 aa10.46□□□□□ -0.73
CPNE1-221ENST00000462352 SPTBN1Q01082 2364 aaKnown RBP10.46□□□□□ -0.74
CPNE1-221ENST00000462352 TRAV27A0A087WT01 109 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 A8MXE2 369 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 DEAF1O75398 565 aaPredicted RBP10.45□□□□□ -0.74
CPNE1-221ENST00000462352 E2F6O75461 281 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 FPR3P25089 353 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 FASP25445 335 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 DNAJA1P31689 397 aaKnown RBP10.45□□□□□ -0.74
CPNE1-221ENST00000462352 OR3A2P47893 321 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 CLDN17P56750 224 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 TFF3Q07654 80 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 ATP6AP1Q15904 470 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 MICAQ29983 383 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 ANKDD1AQ495B1 522 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 ZBED5Q49AG3 693 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 ZNF770Q6IQ21 691 aaPredicted RBP10.45□□□□□ -0.74
CPNE1-221ENST00000462352 C1orf94Q6P1W5 598 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 ZNF474Q6S9Z5 364 aaPredicted RBP10.45□□□□□ -0.74
CPNE1-221ENST00000462352 CASP12Q6UXS9 341 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 NHLRC1Q6VVB1 395 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 AAED1Q7RTV5 226 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 TMEM179BQ7Z7N9 219 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 ZNF100Q8IYN0 542 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 ANKK1Q8NFD2 765 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 OR13C2Q8NGS9 318 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 OR51A7Q8NH64 312 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 MOSPD2Q8NHP6 518 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 APH1AQ96BI3 265 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 TNFRSF13CQ96RJ3 184 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 NTN4Q9HB63 628 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 PARPBPQ9NWS1 579 aa10.45□□□□□ -0.74
CPNE1-221ENST00000462352 KLF2Q9Y5W3 355 aaPredicted RBP10.45□□□□□ -0.74
CPNE1-221ENST00000462352 A1L4Q6 167 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 UNC119BA6NIH7 251 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 H3BNX3 289 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 ENTPD5O75356 428 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 PTP4A3O75365 173 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 CLDN1O95832 211 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 GASTP01350 101 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 F13BP05160 661 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 FCGR1AP12314 374 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 GSSP48637 474 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 SELENOPP49908 381 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 PRPS1P60891 318 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 FBXL19-AS1Q494R0 122 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 ALG10Q5BKT4 473 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 ZFP1Q6P2D0 407 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 NIPAL3Q6P499 406 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 BEND4Q6ZU67 534 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 SLC35D2Q76EJ3 337 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 STK32CQ86UX6 486 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 C10orf67Q8IYJ2 551 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 AQP11Q8NBQ7 271 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 OR10G2Q8NGC3 310 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 GNPDA2Q8TDQ7 276 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 GIPC3Q8TF64 312 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 LRTOMTQ8WZ04 291 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 TXNDC15Q96J42 360 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 EMC6Q9BV81 110 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 RBM24Q9BX46 236 aaKnown RBP10.44□□□□□ -0.74
CPNE1-221ENST00000462352 MCCC2Q9HCC0 563 aa10.44□□□□□ -0.74
CPNE1-221ENST00000462352 INIPQ9NRY2 104 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms