RNA–Protein interactions for RNA: ENST00000460657.1

CPNE6-202, Transcript of copine 6, humanhuman

TSL 2

Gene CPNE6, Length 4,540 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-202ENST00000460657 DEFB133Q30KQ1 61 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 TMEM196Q5HYL7 178 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 VASNQ6EMK4 673 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 SLC46A1Q96NT5 459 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 FOXN4Q96NZ1 517 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 GAS2L1Q99501 681 aaPredicted RBP11.08□□□□□ -0.64
CPNE6-202ENST00000460657 MAP3K3Q99759 626 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 ATXN7L1Q9ULK2 861 aaPredicted RBP11.08□□□□□ -0.64
CPNE6-202ENST00000460657 SIGLEC7Q9Y286 467 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 NEUROG3Q9Y4Z2 214 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 C9J4A7 227 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 MAGEB4O15481 346 aaPredicted RBP11.08□□□□□ -0.64
CPNE6-202ENST00000460657 SPDEFO95238 335 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 TP53P04637 393 aaPredicted RBP11.08□□□□□ -0.64
CPNE6-202ENST00000460657 CLUP10909 449 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 OR1D4P47884 311 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 LIMS1P48059 325 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 AIMP2Q13155 320 aaKnown RBP11.08□□□□□ -0.64
CPNE6-202ENST00000460657 LIPNQ5VXI9 398 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 MRM1Q6IN84 353 aaKnown RBP11.08□□□□□ -0.64
CPNE6-202ENST00000460657 FOXRED2Q8IWF2 684 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 C12orf45Q8N5I9 185 aaPredicted RBP11.08□□□□□ -0.64
CPNE6-202ENST00000460657 SHDQ96IW2 340 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 LCORQ96JN0 433 aaPredicted RBP11.08□□□□□ -0.64
CPNE6-202ENST00000460657 DEFB126Q9BYW3 111 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 BCL2L14Q9BZR8 327 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 PATJQ8NI35 1801 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 MGAMO43451 1857 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 TEX13DA0A0J9YY54 714 aaPredicted RBP11.08□□□□□ -0.64
CPNE6-202ENST00000460657 A0A1W2PPV9 198 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 TP53I11O14683 189 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 FBXO42Q6P3S6 717 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 SLC35D2Q76EJ3 337 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 ZNF615Q8N8J6 731 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 RSC1A1Q92681 617 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 CPNE2Q96FN4 548 aaPredicted RBP11.08□□□□□ -0.64
CPNE6-202ENST00000460657 ST6GAL2Q96JF0 529 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 KCNN3Q9UGI6 736 aa11.08□□□□□ -0.64
CPNE6-202ENST00000460657 TRAV1-2A0A0B4J238 106 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 CALCBP10092 127 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 HOXB9P17482 250 aaPredicted RBP11.07□□□□□ -0.64
CPNE6-202ENST00000460657 AKR1C4P17516 323 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 DYRK1AQ13627 763 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 INSL4Q14641 139 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 PLEKHN1Q494U1 663 aaPredicted RBP11.07□□□□□ -0.64
CPNE6-202ENST00000460657 TMEM156Q8N614 296 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 OR52I2Q8NH67 350 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 SENP5Q96HI0 755 aaPredicted RBP11.07□□□□□ -0.64
CPNE6-202ENST00000460657 LPAR4Q99677 370 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 MIXL1Q9H2W2 232 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 GSKIPQ9P0R6 139 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 TRAV36DV7A0A075B6V5 113 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 EEF1E1-BLOC1S5C9J1V9 151 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 S100A6P06703 90 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 PET100P0DJ07 73 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 NFYAP23511 347 aaPredicted RBP11.07□□□□□ -0.64
CPNE6-202ENST00000460657 MEF2DQ14814 521 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 SGCAQ16586 387 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 SLC25A35Q3KQZ1 300 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 PHF19Q5T6S3 580 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 CARD17Q5XLA6 110 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 AWAT2Q6E213 333 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 ESPNLQ6ZVH7 1005 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 FOXRED1Q96CU9 486 aaPredicted RBP11.07□□□□□ -0.64
CPNE6-202ENST00000460657 DHRS1Q96LJ7 313 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 PHB2Q99623 299 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 ZNF304Q9HCX3 659 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 CHMP1AQ9HD42 196 aaPredicted RBP11.07□□□□□ -0.64
CPNE6-202ENST00000460657 LRIT1Q9P2V4 623 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 STEAP1Q9UHE8 339 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 AIPO00170 330 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 EPXP11678 715 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 ITGA3P26006 1051 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 NDUFAF7Q7L592 441 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 VN1R4Q7Z5H5 301 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 DNAAF1Q8NEP3 725 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 RLN3Q8WXF3 142 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 PRRT1Q99946 306 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 CFHR5Q9BXR6 569 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 C20orf141Q9NUB4 165 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 GLTPQ9NZD2 209 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 COQ3Q9NZJ6 369 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 NUP50Q9UKX7 468 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 AKR7A2O43488 359 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 PLPP2O43688 288 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 KLK3P07288 261 aaPredicted RBP11.07□□□□□ -0.64
CPNE6-202ENST00000460657 AMY2BP19961 511 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 RBMXP38159 391 aaKnown RBP11.07□□□□□ -0.64
CPNE6-202ENST00000460657 DHPSP49366 369 aaPredicted RBP11.07□□□□□ -0.64
CPNE6-202ENST00000460657 SQSTM1Q13501 440 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 ZNF79Q15937 498 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 FCRL6Q6DN72 434 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 ZNF425Q6IV72 752 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 GSG1LQ6UXU4 331 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 PGAM5Q96HS1 289 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 SEC22CQ9BRL7 303 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 PRRG4Q9BZD6 226 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 SLC19A3Q9BZV2 496 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 HPF1Q9NWY4 346 aa11.07□□□□□ -0.64
CPNE6-202ENST00000460657 SLC39A1Q9NY26 324 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms