RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 TNFRSF13CQ96RJ3 184 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 CDCA4Q9BXL8 241 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 PAK1IP1Q9NWT1 392 aaPredicted RBP8.08□□□□□ -1.12
VPS50-207ENST00000458530 ERVK-18Q9QC07 812 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 B4GALT7Q9UBV7 327 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 WARS2Q9UGM6 360 aaKnown RBP8.08□□□□□ -1.12
VPS50-207ENST00000458530 BOKQ9UMX3 212 aaPredicted RBP8.08□□□□□ -1.12
VPS50-207ENST00000458530 VDAC3Q9Y277 283 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 ERGIC3Q9Y282 383 aa8.08□□□□□ -1.12
VPS50-207ENST00000458530 EXOSC1Q9Y3B2 195 aaKnown RBP8.08□□□□□ -1.12
VPS50-207ENST00000458530 MRPS18BQ9Y676 258 aaKnown RBP8.08□□□□□ -1.12
VPS50-207ENST00000458530 CSMD1Q96PZ7 3565 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 BLOC1S5-TXNDC5H3BN57 136 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 MYL12BO14950 172 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 NPIPB7O75200 414 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 TRIM3O75382 744 aaPredicted RBP8.07□□□□□ -1.12
VPS50-207ENST00000458530 CBR3O75828 277 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 BGLAPP02818 100 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 HTR1AP08908 422 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 CCL3P10147 92 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 TFPIP10646 304 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 ACVR2AP27037 513 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 DPP4P27487 766 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 HTR1FP30939 366 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 SDHAP31040 664 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 UQCRC1P31930 480 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 ATP6V1E1P36543 226 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 SLC15A1P46059 708 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 FXYD6P3P58550 94 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 EMX1Q04741 257 aaPredicted RBP8.07□□□□□ -1.12
VPS50-207ENST00000458530 EGR4Q05215 589 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.07□□□□□ -1.12
VPS50-207ENST00000458530 RAB39AQ14964 217 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 AGAP7PQ5VUJ5 663 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 FAM205BPQ63HN1 556 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 TIGD3Q6B0B8 471 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 OR5M10Q6IEU7 315 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 NIPAL3Q6P499 406 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 ADCK1Q86TW2 530 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 VASH2Q86V25 355 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 GTPBP8Q8N3Z3 284 aaPredicted RBP8.07□□□□□ -1.12
VPS50-207ENST00000458530 FAM98AQ8NCA5 519 aaKnown RBP8.07□□□□□ -1.12
VPS50-207ENST00000458530 TAAR8Q969N4 342 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 MIB2Q96AX9 1013 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 OTULINQ96BN8 352 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 KTI12Q96EK9 354 aaPredicted RBP8.07□□□□□ -1.12
VPS50-207ENST00000458530 MRPL48Q96GC5 212 aaKnown RBP8.07□□□□□ -1.12
VPS50-207ENST00000458530 AGAP4Q96P64 663 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 SIGLEC11Q96RL6 698 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 BCL7BQ9BQE9 202 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 PIGQQ9BRB3 760 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 MND1Q9BWT6 205 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 ACOT13Q9NPJ3 140 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 NRIP3Q9NQ35 241 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 INPP5EQ9NRR6 644 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 INIPQ9NRY2 104 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 MRPS18AQ9NVS2 196 aaKnown RBP8.07□□□□□ -1.12
VPS50-207ENST00000458530 ALKBH4Q9NXW9 302 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 MRPL39Q9NYK5 338 aaKnown RBP8.07□□□□□ -1.12
VPS50-207ENST00000458530 GPR83Q9NYM4 423 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 STMN3Q9NZ72 180 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 GRHPRQ9UBQ7 328 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 AASSQ9UDR5 926 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 RSL24D1Q9UHA3 163 aaKnown RBP8.07□□□□□ -1.12
VPS50-207ENST00000458530 DIMT1Q9UNQ2 313 aaKnown RBP8.07□□□□□ -1.12
VPS50-207ENST00000458530 POLHQ9Y253 713 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 HDGFL3Q9Y3E1 203 aa8.07□□□□□ -1.12
VPS50-207ENST00000458530 PCSK5Q92824 1860 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 A0A1W2PRG6 482 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 MCIDASD6RGH6 385 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 LINC01387J3KSC0 135 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 XKRYO14609 159 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 SEC14L5O43304 696 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 RNF13O43567 381 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 TRMUO75648 421 aaKnown RBP8.06□□□□□ -1.12
VPS50-207ENST00000458530 SEC14L2O76054 403 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 RENP00797 406 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 STSP08842 583 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 TSPAN19P0C672 248 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 VSIG8P0DPA2 414 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 CNR1P21554 472 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 PCMT1P22061 227 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 PSMB9P28065 219 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 SRD5A2P31213 254 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 CAPZA2P47755 286 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 DAP3P51398 398 aaKnown RBP8.06□□□□□ -1.12
VPS50-207ENST00000458530 MLLT10P55197 1068 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 SOX8P57073 446 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 CTXN1P60606 82 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 RPS7P62081 194 aaKnown RBP8.06□□□□□ -1.12
VPS50-207ENST00000458530 ACTC1P68032 377 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 ACTA1P68133 377 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 RPL18Q07020 188 aaKnown RBP8.06□□□□□ -1.12
VPS50-207ENST00000458530 PMS2P3Q13401 168 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 SLC35D3Q5M8T2 416 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 SLC35F1Q5T1Q4 408 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 SYT6Q5T7P8 510 aaPredicted RBP8.06□□□□□ -1.12
VPS50-207ENST00000458530 AADACL4Q5VUY2 407 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 UBE2UQ5VVX9 321 aa8.06□□□□□ -1.12
VPS50-207ENST00000458530 XAF1Q6GPH4 301 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms